Paraburkholderia phymatum: Bphy_5450
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Entry
Bphy_5450 CDS
T00704
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00100
Steroid biosynthesis
bph00909
Sesquiterpenoid and triterpenoid biosynthesis
bph01100
Metabolic pathways
bph01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Bphy_5450
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Bphy_5450
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bph01006
]
Bphy_5450
Enzymes [BR:
bph01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Bphy_5450
Prenyltransferases [BR:
bph01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Bphy_5450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
AAA_SelU
Motif
Other DBs
NCBI-ProteinID:
ACC74527
UniProt:
B2JNX4
LinkDB
All DBs
Position
2:2597081..2598136
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AA seq
351 aa
AA seq
DB search
MSSSTRAFLLGPLLKGVSRSFYLTLRILPVGMRDPIGLAYLLARAADTIADTALIPPEQR
LALLLALREQVNGATGDGEFARRLASEVAGQQTQSDEKVLLESIAPALDVLSQLDDADRA
AVREIVTTLTTGMEFDLRTFPDEGSGQIVALRTWDELDRYTYLVAGCVGEFWTKMTYAHL
PGTLKTGSVTMLERGVRFGKALQMTNVLRDCGKDLRIGRCYLPSVMLDRFGLTPQMLLDP
QASKRAQPLMHELVRKSLDHFRAALDYTLAIPRFSLRLRLACMWPIVIGLETLLLLVDNA
HWLEPAKVSKVQRNQVYGIIARSLPVSLSDARLRHWVDGLIGAIEARIGAR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttccactcgggcctttctgcttggtccgttgctcaaaggggtgtcccgttcc
ttctatctgacgctgcgcattctccccgtcggcatgcgcgacccgatcggcctcgcgtat
ttgctggcgcgtgccgcggacacgatcgccgacaccgcgctgattccgccggagcagcgg
cttgcgctgctgctcgcgttgcgcgagcaggtcaacggcgcgacgggcgacggcgaattc
gcgcggcgtcttgcgagcgaagtggcggggcagcagacgcagtcggatgaaaaagtgctg
ctcgaatcgatcgcgcccgcgctcgacgtgctttcccaactggacgatgccgaccgcgct
gccgtgcgcgagatcgtcacgacgctgacgacgggcatggaattcgacttgcgcacgttc
cccgacgagggctcggggcagattgttgcgctgcgcacatgggatgaactggatcgctac
acgtatctggtggcaggttgcgtcggcgagttctggacgaagatgacgtacgcgcatctg
cccggcacgctcaagaccggttccgtgacgatgctcgagcgcggcgtgcgcttcggcaaa
gcgctgcagatgaccaacgtgctgcgcgattgcggcaaggatttgcggatcggccgctgc
tatctgccttcggtgatgctcgatcgtttcggactcacaccgcagatgctgctggacccg
caggcatcgaagcgcgcgcaaccgttgatgcacgaactcgtgcgcaagtcgctcgatcat
ttccgcgcggcgctcgactacacgctggcgattccgcgcttttcgctgcgtttgcggctc
gcctgcatgtggccgatcgtgatcgggctcgaaacactgctgctgctggtcgataacgcg
cattggctggagccggcgaaagtgtcgaaagtccagcggaaccaggtgtatggaatcatt
gcccgctcgctgcccgtgtcgctgtcggatgcgcggctgcgccactgggtcgatggactg
atcggcgcgatcgaagcgcgcatcggcgcgcgatga
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