Paraburkholderia phymatum: Bphy_5629
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Entry
Bphy_5629 CDS
T00704
Name
(GenBank) GAF sensor hybrid histidine kinase
Organism
bph
Paraburkholderia phymatum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
YscO-like
IFT57
GAF_3
ERM_helical
OmpH
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
ACC74703
UniProt:
B2JUS5
LinkDB
All DBs
Position
pBPHY01:100866..106898
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AA seq
2010 aa
AA seq
DB search
MDTFEVESSLHSDEQLSHIAAALNALRRGDTSYRLPENWTGKAAEIASEFNQLSSQTRHI
GQRLGRISRHLRGHGELKKEIAIESGALTGIWLDSASHVNLLFESVTTANECTKTVLGAL
ASLQKGEAASLPADWTGIHGKVAHVFNDVVEQNVRIAEELGRLSKVVGKEGRLKERAALP
YARGFWGDSIDAVNSLIADLVHPTSEVARVIGAVAQGDLSKSMALEADGRPLQGEFFRTA
KTINTMVEQLGTFAVEVTRVAREVGTEGKLGGQADVQGVAGTWKDLTDSVNSMAGNLTSQ
VRNIAEVTKAVAAGDLSKKITVDVKGEILELKNTINTMVDQLRSFASEVTRVAREVGTEG
KLGGQADVQGVAGTWKDLTDNVNFMAGNLTSQVRNIAEVTKAVAAGDLSKKITVDVKGEI
LELKNTINTMVDQLRSFASEVTRVAREVGTEGKLGGQADVQGVAGTWKDLTDSVNSMGGN
LTAQVRNIADVTTAVAAGDLSKKITVDVKGEILELKNTINTMVDQLRSFASEVTRVAREV
GTEGKLGGQADVQGVAGTWKDLTDSVNSMAGNLTAQVRNIADVTTAVAAGDLSKKITVDV
KGEIRELKNTINTMVDQLGSFASEVTRVAREVGTEGKLGGQADVQGVAGTWKDLTDSVNS
MAGNLTSQVRNIAEVTKAVAAGDLSKKITVDVKGEILELKNTINTMVDQLRSFASEVTRV
AREVGTEGKLGGQADVQGVAGTWKDLTDNVNFMAGNLTSQVRNIADVTKAVAAGDLSKKI
TVDVKGEILELKNTINTMVDQLGSFASEVTRVAREVGTEGKLGGQADVQGVAGTWKDLTD
NVNFMAGNLTSQVRNIADVTKAVAAGDLSKKITVDVKGEILELKNTINTMVDQLRSFASE
VTRVAREVGTEGKLGGQAYVQGVAGTWKDLTDNVNFMAGNLTSQVRGIAKVVTAVANGDL
ARKLTVEAKGEVAALADTINSMTETLATFADQVTTVAREVGVEGKLGGQAKVPGASGTWK
GLTENVNQLAANLTTQVRAIAEVATAVTQGDLTRSITVEALGEVAALKDTINEMIRNLKD
TTQVNTEQDWLKTNLAKFSRMLQGQKDLVAVGQLILSELAPVVGVQQAEFFVLDPSEHAA
SLRLMASYASSGHSAHGKRVQMGEGLIGQCAVERRKILLEPSASEPVRITSGLISIVPHN
VLVLPVVFEGQVKGVIELASSECFNPTHLAFLDQLTESIGIVINTIEANTRTEDLLKQSQ
SLARELQSRQEELQTTNEELQEKARLLAHQNQEVERKNTEVEQARQALEEKAKQLALTSK
YKSEFLANMSHELRTPLNSLLILSDQLCKNSEGNLSTRQIEFSRTIHSSGNELLMLINDI
LDLSKIESGTVAMDFAEHRLADLTSYVERTFRHVAEARNVDFVIELGTHLPASIRTDIKR
LQQILKNLLSNAFKFTHRGHVTLSVEEVSGGWSADNERLHSAPACIAFSVSDTGIGISAD
KQQIIFEAFQQADGSTSRKYGGTGLGLAISRELSKLLGGEIRLISSPNKGSTFTLYLPLS
AEMGRVARKTVSLSGDAAPAAVLDEGVSEFDLLAAHEFVDTVVGDTRELVSAPEDDRFSI
MDGDRVLMIVENDLAFAHFLLDAAREQGFKGLVTPLGAPALTLAEQFKPDVITLDLFLPD
MDGWRVLGRLKNDMATRHIPVCVISTDESRERALKAGAFAFLTKPIQAREILDDALSVLA
VHASAAPRTLLVALGDSPARKEFAALVSSERIVPIFADSREQLLNALAEGQVSAVVLGAE
MFQACSDEMSAALSHRGTFAPLPLIVFAPGQAAGPWTREIECFNPFVAPDMSRLLDLSVA
WLHCDGKWLPQQARDIIGSLHGANEELTGRKALIVDDDMRNIFALATVLEDHGMRHVWAD
NGRDAIRLVETDSEIDIVLMDIMMPEMDGLVTTSEIRKLPVGRTLPIIAVTAKAMKGDRE
RCIEAGAWDYLSKPVNREDLLAVLHAWLHR
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atggacacgttcgaagtcgagtcatcgctgcattccgatgagcagctttcccacatcgcg
gccgcgttgaatgcattgcggcggggcgacacgtcatatcgtctgcccgaaaactggacg
ggcaaggcggcagagattgcaagcgagttcaaccagttgtcgtctcagacgagacacatc
ggacagcgcctcggcaggatctcgagacacctgaggggccacggggagttgaagaaggaa
attgccatcgagagcggcgcgctgacagggatctggctcgacagcgcatcgcacgtcaat
cttctcttcgagagcgtaacgacggccaacgagtgtacgaaaacagtccttggcgcgcta
gcgtcgctccagaaaggcgaagccgcgtcgttgccagcggactggacgggcattcacggc
aaggtcgcacacgtcttcaacgacgtggtcgaacagaacgttcgcattgcagaagaactg
ggccggttgagcaaggtagtcggcaaggaggggcggctgaaggaacgtgcggcgcttccc
tatgctcgcggattctggggcgattcgatcgacgccgttaactctttgatcgcggacctc
gtgcacccgactagcgaagtggcgcgcgtcatcggcgcagttgcgcaaggagatctttcg
aagagcatggcgctggaagcagatgggcgtccattgcaaggcgaattctttagaaccgcc
aagacgatcaatacgatggtcgagcaactcggcaccttcgcggtcgaagtcacgcgtgtg
gcgcgggaggtgggcacggaaggcaagctcggcggccaggcggatgtgcagggcgtggcg
ggcacatggaaggatctgaccgactcggtcaactcgatggcgggcaatctgacgagccag
gtgcgcaatatcgccgaagtgacgaaagcggttgcagcgggcgacctgtcgaagaagatc
acggttgacgtgaagggcgaaatcctcgaactgaagaacacgatcaacacgatggtggac
cagttgcgctcgttcgcgtcggaggtgacgcgcgtcgcacgcgaggtgggcacggaaggc
aagctcggcggtcaggcggatgtgcagggggtggcgggtacatggaaggatctgaccgac
aacgtgaacttcatggcgggcaacctgacgagccaggtgcgcaacatcgccgaagtgacg
aaagcggttgcagcgggcgatctgtcgaagaagatcaccgtcgacgtaaaaggcgaaatc
ctcgaactgaagaacaccatcaacacgatggtggatcagttgcgctcgttcgcgtccgaa
gtgacgcgcgtcgcacgtgaggtgggcacggaaggcaagctgggtggccaggcggacgtg
cagggcgtggcgggtacatggaaggatctcaccgattccgtgaactcgatgggcggtaac
ctgactgcgcaggtgcgcaatatcgccgacgtaacgactgctgttgcagcaggcgacctg
tcgaagaagatcactgtcgacgtgaagggtgaaatcctcgaactgaagaacacgatcaac
acaatggtggatcagttgcgctcgttcgcgtcggaggtgacgcgcgtggcgcgcgaggtc
ggcacggagggcaagctgggcggccaggcggacgtgcagggcgtggcgggtacatggaag
gatctgaccgactccgtcaattcgatggcgggcaacctgacggcgcaggtgcgcaacatc
gcggacgtgacgactgccgttgctgcgggcgacctgtcgaagaagatcaccgtcgacgtg
aagggcgaaattcgcgaactgaagaacacgatcaacacgatggtcgatcaactcggttcg
tttgcatccgaggtgacgcgggtggcgcgggaggtgggcacggaaggcaagctcggcggc
caggcggatgtgcagggcgtggcgggcacatggaaggatctgaccgactcggtcaactcg
atggcgggcaatctgacgagccaggtgcgcaatatcgccgaagtgacgaaagcggttgca
gcgggcgacctgtcgaagaagatcacggttgacgtgaagggcgaaatcctcgaactgaag
aacacgatcaacacgatggtggaccagttgcgctcgttcgcgtcggaggtgacgcgcgtc
gcacgcgaggtgggcacggaaggcaagctcggcggtcaggcggatgtgcagggggtggcg
ggtacatggaaggatctgaccgacaacgtgaacttcatggcgggcaacctgacgagccag
gtgcgcaacatcgccgatgtgacgaaggccgtggccgcaggcgatctgtcgaagaagatc
accgtcgacgtgaagggcgaaatcctcgaactgaagaacacgatcaacacgatggtcgat
cagcttggttcgtttgcatcggaggtaacgcgcgtcgcacgtgaggtgggcacggaaggc
aagctcggcggtcaggcggatgtgcagggcgtggcgggtacgtggaaggatctgaccgac
aacgtgaacttcatggcgggcaacctgacgagccaggtgcgcaacatcgccgacgtgacg
aaggccgtggcagcaggcgacctgtcgaagaagatcaccgtcgacgtgaagggtgaaatc
ctcgaactgaagaacacgatcaacacgatggtggaccagttgcgctcgttcgcgtcggag
gtgacgcgcgtggcgcgcgaggtcggcacggaaggcaagctgggcggccaggcgtacgtg
cagggcgtggcgggtacatggaaggatctgaccgacaacgtgaacttcatggcgggcaac
ctgacaagccaggtgcgcggtatcgcgaaggtggtgacagccgttgcgaacggcgacctg
gcgcgcaagctgaccgtcgaagccaaaggcgaagtggcggcgcttgcggacaccatcaac
agcatgacggaaacgctcgcaaccttcgccgatcaggtgaccaccgtggcacgtgaggtc
ggcgtggaaggcaagctcggcggccaggcgaaggtgccgggcgcgtcgggcacgtggaag
ggtctgacggagaacgtcaaccagctcgctgcgaacctgacgacgcaagtgcgcgccatt
gccgaagtggcgacggccgtcacgcagggcgacctgacgcgctcgattaccgtcgaggcg
cttggcgaagtcgccgcgctgaaggatacgatcaacgagatgatccgtaacctcaaggac
accacgcaggtcaacaccgagcaggactggctgaagacgaacctcgcgaagttcagccgc
atgctgcaggggcagaaggatctcgttgcggtcgggcagttgatcctgtcggagctggcg
cctgtcgtcggcgtgcagcaggcggaattcttcgtgctcgacccatccgaacatgccgcg
tcactgcgcctgatggcgagctatgcatcgagcggtcattcggcgcacggcaagcgtgtg
cagatgggcgaagggctgatcggccaatgcgcggtcgagcggcgcaagattctgctggag
ccgtcggccagcgagccggtccgcattacgtccggtctgatcagtatcgtgccgcacaat
gttctcgtgctgcccgtcgtgttcgaaggacaggtaaaaggtgtgatcgaactcgcgtcg
tcagagtgcttcaacccgacacacctcgcgtttctcgatcagctgacggaaagcatcggc
atcgtcatcaatactatcgaggccaacacccgcacagaggatctgctgaaacagtcgcaa
tctctcgcgcgtgaactgcagagccgacaggaagagctgcaaacgacgaacgaagaactg
caggagaaagcgcgcttgctggcgcaccagaaccaggaagtcgaacgcaagaacaccgag
gtcgaacaggcgcgccaggcgctcgaagaaaaggcgaagcagctcgcattgacgtcgaag
tacaagtcggagtttctggccaacatgtctcacgagcttcgcacgccgctcaacagcctg
ttgattctctccgatcaactgtgcaagaactccgagggcaatctgtcgacaaggcagatc
gagttctcgcgcacgatccattcgtcaggcaatgaactgctgatgctgatcaacgacatt
ctcgacctgtcgaagatcgagtcgggtacggttgcaatggattttgcggagcatcgcctt
gcagatttgacgtcatatgtggagcgcacgttccggcacgttgccgaggcacgcaacgtc
gacttcgtgatcgaactcggcacgcacttgccggcatcgattcgcaccgatatcaagcgc
ctgcaacagatcctgaagaacctgctgtcgaatgcgttcaagttcacgcatcgaggtcac
gtcacgctgtcggtcgaggaggtgtcgggcggctggagcgcggacaatgaaagactgcat
agcgcgcctgcatgcatcgcattctcggtgtcggatacgggcatcggcatttcggcagac
aagcagcagatcatcttcgaggcattccagcaggccgatggcagcacgagccggaagtat
ggcggcacgggcctcggcctcgcgatcagccgcgaactgtcaaaactgctgggcggcgaa
atccggctcatcagttcgccgaacaagggaagcacgtttacgctctatcttccgctgtcg
gctgaaatggggcgcgtcgcacgcaagaccgtttctctttccggcgatgcggcgcccgcg
gccgtgcttgatgaaggcgtcagcgagttcgatctgcttgcggcgcatgagttcgtcgat
accgtcgtgggcgacacgcgcgaactggtgagcgcccccgaggacgatcgcttcagcatc
atggacggagaccgtgtgctgatgatcgtcgaaaacgatctggcgtttgcgcattttctt
ctcgacgctgcacgtgaacagggattcaagggactcgtcacgccgctcggtgcgcctgcg
ctgacgcttgccgaacagttcaagcccgatgtcatcacgctcgatctgttcctgccggac
atggacggctggcgcgttctgggccgcctcaagaacgacatggcgacacgtcatatcccc
gtttgcgtgatttcaacggacgagtcgcgagagcgtgccctcaaggccggtgcgtttgcc
tttctcaccaagccgatccaggcgcgtgaaatactggacgatgcattgagcgtgctggcc
gtccatgcgagtgcagcgccgcgcacgctgctcgtggcgctaggcgattccccggcacgc
aaggagttcgctgcgttggtttccagcgagagaatcgtgcccatattcgcggactcgcgc
gaacagctattgaacgcgctcgccgaagggcaagtatccgctgtcgtgttgggcgcggag
atgttccaggcctgcagcgacgagatgagcgccgcgctgtcgcatcgcggtacttttgca
cccttgccgctgatcgttttcgcacccggtcaggcggccggcccgtggacgcgcgaaatc
gaatgcttcaatccgttcgtcgcgcccgacatgagtcgtttgctcgacctgtccgtggca
tggctgcactgcgacgggaaatggctgccgcagcaggcacgcgacattatcggcagcctg
catggcgcgaatgaagagctgactggacgcaaggcgttgatcgtggacgacgacatgcgc
aacatcttcgcactggcgaccgttctcgaagatcatgggatgaggcacgtctgggccgac
aacggcagagatgccatcaggctcgttgaaaccgactccgaaatcgacatcgtgctgatg
gacatcatgatgccggagatggatggtctcgttaccacgagtgaaatccgcaagcttccc
gtcggtcgcacgcttcccatcatcgcggtcactgcaaaggccatgaagggcgatcgggag
cgatgcatcgaggcgggtgcatgggactatctgtcgaagccggtcaaccgcgaggatctg
cttgcggtgctacatgcgtggctgcatcggtag
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