Paraburkholderia phymatum: Bphy_5743
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Entry
Bphy_5743 CDS
T00704
Name
(GenBank) Peptidoglycan-binding LysM
Organism
bph
Paraburkholderia phymatum
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Gene cluster
GFIT
Motif
Pfam:
Phage_lysozyme
LysM
Peptidase_M23
Big_1
MG4
LysM_RLK
CrtC
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
ACC74811
UniProt:
B2JV34
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Position
pBPHY01:complement(245829..247544)
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AA seq
571 aa
AA seq
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MQRSSNASDYVSDVTVFFKDHFGVPIQNLKVEIRGIEDQAGHMYHSASTNARGAIQFSVR
KGEELSVHVKRWTSESMKEVARLSAALSQIAFHLTSPKTQHDLPTKTDDSGGGNYWRGTY
KVKAHDNLTAIARKYHTSVDLLKRVNGLKSDLIVVGQTLKVPPVESRKSDEPVPKKPAPS
GTPPQNDHSNNDHGAPTTMPRRGPAPIIFPIAARPLNDEGGVYGTPSCDYTWTKQLHGGG
YDQARYGANRAGGRKHAARDLYVKSDTPIVAIAPGVVIKCEFFYCHTWQISIHHKTTDGR
EFIALYGEVKPSSITVKIGDTVNQGQILAASGTLLKANGTPLHVVGNENVSMLHFEAYSG
SLGFDSHSRLNGSAMPAPFQRRADLIDSLTILLEGYQATFLDAPPLKAVGQRIAIAQLNI
SEQGKAFIKGWEGVYYDDSKANTYYYDDSKGYCTVGWGHLISKSSCTANGYVAMSSKISV
ADAQTLFDRDVARIETAVKNAISVPLYQYEYDALVSLAYNMGSLIKAPSLCRKLNSGDYV
GAPAEFLDIENKTRREREHDMFCLNTYNSNH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagatccagtaatgcaagcgactacgtttcagacgtaacggtctttttcaaagat
cactttggcgtgcccatccagaatttgaaagttgagattaggggcatcgaggatcaggct
ggccatatgtaccattcggcatcgacaaatgcacgtggtgcgatacagttttctgttcgg
aagggtgaagagctctcagttcacgttaaacgctggacaagtgaaagtatgaaggaggtg
gctcgactcagcgctgcgctttcgcaaatcgcatttcatcttaccagtccaaaaacgcag
cacgatttgccaaccaaaacggatgactcgggaggtggcaattattggagaggaacctac
aaggtcaaggcacatgacaatctgaccgcaattgccaggaagtatcatacgagtgttgat
cttctaaaacgcgtgaacggcctgaagtcggatctaatcgtggtcggccagacgctcaag
gtgccacccgtcgaatcacggaaatcggacgagccggtgccaaagaagccggcgccgagc
ggcacgccaccgcagaacgatcattcgaataatgaccatggcgcgccaaccacgatgcct
cgccgcggtcctgcgccgatcatcttcccgatcgcagcccgtccgctcaacgatgaaggc
ggcgtctacggcacgccgtcatgcgactacacgtggaccaagcaactgcacggcggggga
tacgatcaggcgagatacggcgcgaaccgagcgggcggccgaaaacatgccgcccgggat
ctgtacgtgaagtcagatacgccgatcgttgcaatcgcgcctggtgttgtcataaagtgc
gagtttttctactgtcacacgtggcagatcagcattcaccataagacaaccgatggtcgc
gagttcatcgcgctgtacggcgaagttaagccttcatcgatcacggtgaagatcggggac
acggtaaaccaagggcagatcctcgcggctagcggcaccctactgaaggcgaacggcacg
ccgctgcacgtcgtgggcaacgagaacgtgtcaatgctgcatttcgaggcgtattcgggt
tctcttggatttgattcgcactcgaggctgaacggctcagcgatgcccgcgccatttcag
cggcgtgcggatctgatcgattcgctaacgatccttctggagggctaccaggcaaccttc
ctcgacgcaccgccgctgaaggcagttggtcagcgaattgctattgcgcaattgaacata
tctgaacagggtaaggcgtttatcaagggctgggaaggggtctactacgatgattcgaag
gcgaatacatactactacgacgacagtaaaggttattgcacggttggttggggacatttg
atcagcaaaagcagttgtacggcgaacggatacgtcgcgatgtcgagcaaaatcagtgtc
gcggacgcgcagacgttgttcgatcgcgacgttgcgagaattgagacggctgtgaagaat
gcgatcagtgtgccgctctatcaatacgagtacgatgcgctggtatcgcttgcctacaac
atgggaagcctcataaaggcccccagtttgtgccgtaagttgaatagcggtgactacgtc
ggcgcgcccgctgaattcctggacatagagaacaagacacggcgagaacgcgagcacgac
atgttttgtcttaatacttacaattcgaatcactaa
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