Paraburkholderia phymatum: Bphy_5902
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Entry
Bphy_5902 CDS
T00704
Name
(GenBank) ABC spermidine/putrescine transporter, periplasmic ligand binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bph
Paraburkholderia phymatum
Pathway
bph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphy_5902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bph02000
]
Bphy_5902
Transporters [BR:
bph02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Bphy_5902
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
TAT_signal
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ACC74966
UniProt:
B2JVI9
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All DBs
Position
pBPHY01:complement(422312..423613)
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AA seq
433 aa
AA seq
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MNDDKTAAAVQHVEAETVGKGMSRRTFIKGAVAAAGITGFPYVHAQEKITLRYLGTAVNQ
SAEIAKKFKEDTGIEIQYIPVTTDDVTKRIITQPNSFDIVDTEYFALKKLIPAGTLAGMD
AKRIKLADKITPVLTKGEVDGKKIGDQGTAPKKVMFLKGARSTEFSAMPTEWMTLIPTTY
NADTLGIRPDLIARPVTTWADLLNPQFKGKAALLNIPAIGIMDAAMAIEAMGRVKYGDKG
NMSKAEIDQTIKILIEAKRAGQFRAFWRDFNESVNLMASGEVVIQSMWSPAVTKVRTMGI
ACKFQPLKEGYRSWASGFGFPRSLQGKKLDAAYEFVNWFQDGWAGAYLMRQGYYPGVTET
AKSHMQAYEWDYWMEGKPAAQDIKAPDGQLLEKAGSVRDGGSYSQRMGAIACWNAVMDEN
IYMVQKWNEFIAA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgacaagacggcggcagccgtgcagcacgtggaagcagagaccgtcggcaag
ggtatgtcgcgccgcacgttcatcaagggcgcggtcgcggcagcaggcatcacgggtttt
ccgtacgtccatgcacaggagaaaatcacgctgcgctacctgggcacggccgtcaaccag
agcgcggaaatcgcgaaaaagttcaaggaagacacgggcatcgagattcaatacatcccc
gtcaccaccgacgacgtaaccaagcgcatcatcacccagcccaattcattcgatatcgtc
gacaccgagtacttcgcgctcaagaagctcatccccgcgggtacgctcgcgggcatggac
gcgaagcgcatcaaactcgccgacaagatcacccccgtgctgacgaaaggcgaagtggac
ggcaagaagataggcgaccagggcacggcgccgaagaaggtcatgttcctcaaaggcgcg
cgctcgacggagttctcagccatgccgacggaatggatgacgctgattccgaccacttac
aacgccgacacactgggcattcggcccgatctcatcgcacgccccgtgacgacgtgggcg
gacctgctcaatccgcaattcaagggcaaggctgcgctgctcaatattcccgctatcggc
atcatggatgcagcgatggcgatagaagcgatgggacgcgtgaagtacggcgataaaggc
aacatgtccaaggcggaaatcgaccagaccatcaagattctgatcgaagcaaagcgcgca
ggccagttccgcgcattctggcgcgacttcaacgagagcgtgaacctgatggcttcgggc
gaggtcgtgatccagtccatgtggtcgcccgccgtcacgaaagtgcgcacgatgggcatt
gcctgcaagttccagccgctcaaggaaggttaccgctcatgggcgtcgggcttcggcttt
ccgcgctccctgcagggcaagaagctcgatgccgcctacgaattcgtcaactggtttcag
gacggctgggcaggggcttatctgatgcgtcagggctattacccaggcgtcacggaaacg
gcgaagtcgcatatgcaggcctacgaatgggattactggatggaaggcaaacccgctgca
caggacatcaaggcacccgacggccagttactcgagaaagcggggagcgtgcgcgacggc
ggatcgtacagtcagcgtatgggcgccattgcctgctggaacgccgtgatggacgagaac
atctacatggtgcagaagtggaacgagttcatcgccgcatga
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