Paraburkholderia phymatum: Bphy_5930
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Entry
Bphy_5930 CDS
T00704
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00260
Glycine, serine and threonine metabolism
bph00460
Cyanoamino acid metabolism
bph00630
Glyoxylate and dicarboxylate metabolism
bph00670
One carbon pool by folate
bph00680
Methane metabolism
bph01100
Metabolic pathways
bph01110
Biosynthesis of secondary metabolites
bph01120
Microbial metabolism in diverse environments
bph01200
Carbon metabolism
bph01230
Biosynthesis of amino acids
bph01240
Biosynthesis of cofactors
bph04981
Folate transport and metabolism
Module
bph_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bphy_5930
09102 Energy metabolism
00680 Methane metabolism
Bphy_5930
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphy_5930
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Bphy_5930
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Bphy_5930
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Bphy_5930
Enzymes [BR:
bph01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Bphy_5930
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Phage_RBD_prop
Motif
Other DBs
NCBI-ProteinID:
ACC74994
UniProt:
B2JVL7
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All DBs
Position
pBPHY01:complement(452870..454186)
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AA seq
438 aa
AA seq
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MFSYKNTLAVTDPELQHAIAAETQRQQDHIELIASENYTSPAVLEAQGSQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKQLFNADHANVQPHSGSQANQAVYLSALTPGDTILGMS
LAHGGHLTHGASVNVSGKLFNAVSYGLDAETEEIDYDTAQRLAEQHRPRMIVAGASAYSL
VIDWQRFRAIADSVGATLLVDMAHYAGLVAAGLYPSPVGIADYVTTTTHKTLRGPRGGLI
LSRAETAKAIDSTIFPGIQGGPLMHVIAGKAAALREAMTDEFRQYQQQVLVNARTIAQTL
QQRGLRIVSGRTDSHVFLVDLRAKNVTGKEAEAALGRAFITVNKNAIPNDPQKPFVTSGV
RIGSPAITTRGLREAEAEQLAHLIADVLDAPGNDLVIRRTADAVLALTARFPVYRDAPDA
LRDDAPRDGRAAAGDGAH
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctacaaaaacacgctcgccgttaccgatccggaactgcagcatgcaatcgcg
gcagaaacgcagcgccagcaggatcacatcgaactcatcgcatccgaaaactatacgtcg
cccgccgtgctcgaagcacagggttcgcagcttacgaacaagtacgcggaaggctatccc
ggcaagcgctactacggcggatgtgaacacgtcgacgtcgtcgagcagctcgcgatcgat
cgcgcgaagcagctgttcaacgccgatcatgcgaatgtgcagccgcattcgggatcgcag
gcgaatcaggccgtgtatctgtccgcgctcacaccgggcgatacgattctcggcatgtcg
ctcgcgcatggggggcacctcacgcacggcgcgtccgtgaacgtgagcggcaagctgttc
aacgcggtgtcgtatggcctcgatgccgaaacggaagaaatcgactacgacacagcccaa
cggctcgcggagcaacaccggccgcgcatgatcgtcgcgggcgcgtcagcgtattcgctc
gtgatcgactggcagcgttttcgtgcgattgccgacagcgtcggcgcgacgctgctcgtc
gatatggcgcactacgccggtctcgtcgcggccggcctttacccgagcccggtcggtatc
gccgattacgtcaccaccaccacgcacaagacgctgcgcggtccgcgcggcggcctgatc
ctttcgcgcgccgaaaccgcgaaggcgatcgattcgacgatctttcccggcatccagggc
ggcccgttgatgcatgtgatcgcgggcaaggcggcggcgctgcgcgaagcaatgacggac
gaattccgccagtaccagcaacaggtgctcgtcaacgcccgcaccattgcgcagacgctc
cagcagcgcggcctgcggatcgtgtcggggcgcaccgactcgcacgtgttcctcgtcgat
ctgcgcgcgaagaacgtgacgggcaaggaagcggaagccgcgctcggccgcgcgttcatc
acggtcaacaagaacgcgattccgaacgatccgcaaaagcccttcgtgacgagcggcgtg
cgcatcggttcgcccgctatcacgacgcgcggcctgcgcgaagccgaagcggaacagctc
gcgcatctgattgccgacgtgctcgacgcgcccggaaacgatctggtgatccgccgcact
gccgacgccgtactcgcgctgaccgccaggttcccggtgtatcgcgacgcacccgacgcg
ctgcgcgacgacgcaccgcgcgacggccgtgcagccgccggcgacggcgcgcattga
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