Paraburkholderia phymatum: Bphy_7394
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Entry
Bphy_7394 CDS
T00704
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00040
Pentose and glucuronate interconversions
bph01100
Metabolic pathways
bph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Bphy_7394
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bphy_7394
Enzymes [BR:
bph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Bphy_7394
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ACC76371
UniProt:
B2JXL3
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Position
pBPHY02:162440..163636
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AA seq
398 aa
AA seq
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MNWRLLMTILIANLLCARGSAHGASSVPDSSAATGSRASQAAITAHPPTNTGGFATATGS
DDSAVMVASLADLLAAFNTRQHHILVKGEIYGGPRLTTVTFASTDWNNTTIEGASGGSAV
LQNIQLKFDGEMLPAGKNIQNVVIRNITFHGVIRDLQALPAQVYGTSSNAGINYEGVSLR
RVTNAWVDHCAFYDTSDDLMSVTLSSDKVTVSYSRFYFTSEWLTMHPDPMWNWAGKNQDL
ANERLAMLVGANRQDSYAYGGSRLHVTLHHNQFGPNLKGRPLLRGWIHAYDNYFDNGATP
TGLTAAGSDETQYNALQIGSGGVVYSENNYFFRTNQSIQIGLDSPDDVYAFHENANRYDQ
TTGRSVKGEAFSLAPVGYAYRAGTASSILKAVQTFGPR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcggctactcatgacaatattaatcgcaaatctactgtgcgctcgtggtagc
gcgcatggtgcgtcttctgtgccagattcctcagcagcgacaggctcgcgggccagtcag
gcagcaatcaccgcgcacccgccgacgaacaccggcgggttcgcaacggcgactgggtca
gacgattccgccgtcatggttgccagcctcgctgatctgctggccgcatttaatacgcga
cagcaccacatccttgtcaagggcgaaatttacggcggtccgcgactgacgaccgtcacc
ttcgcgagcacggactggaacaacaccacgatcgaaggcgccagtggaggcagtgccgtg
ctgcaaaatatccagctcaaatttgacggcgaaatgctgccggcaggcaagaacatccag
aatgtcgtgatcaggaacatcacttttcatggcgttatccgggatcttcaggccctgccc
gcccaagtctacggcacatccagcaacgccggtatcaattatgaaggcgtgtcgcttcga
cgggtcaccaatgcgtgggtcgatcattgtgccttctacgatacgagcgacgacctaatg
agcgtgacactgtcatcagataaggtgacggtttcctatagccggttctatttcaccagc
gaatggctgacgatgcaccccgatcctatgtggaactgggcgggcaagaaccaggacctg
gccaatgaacgtctggcgatgctggtaggcgcaaacaggcaggattcctatgcatatgga
gggagcaggctgcatgtcacgttgcaccacaaccagttcggcccgaacctaaagggacgt
ccgctgctgcggggctggattcacgcctacgacaactatttcgataacggggcgacaccc
actggcctcacggctgctggctcagacgagacccagtacaacgccctgcagattggcagc
ggcggcgttgtctattcggaaaacaactattttttcaggacaaaccagagcattcagatt
ggcctggattcgccggacgacgtctacgccttccatgagaacgcaaaccggtacgaccag
accaccggcagatcggtaaagggcgaggctttttcgctcgcgccagtcggttacgcgtat
cgggccgggacagcctcatctattctcaaagccgtgcagaccttcggtcctcgctag
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