Battus philenor (pipe-vine swallowtail): 137919046
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Entry
137919046 CDS
T10485
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137919046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137919046
03012 Translation factors [BR:
bphi03012
]
137919046
Enzymes [BR:
bphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137919046
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137919046
Translation factors [BR:
bphi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
137919046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
OB_NTP_bind
HA2_C
AAA_19
nSTAND3
AAA_11
AAA_22
T2SSE
NPHP3_N
Cas3-like_C_2
nSTAND1
AAA_29
Motif
Other DBs
NCBI-GeneID:
137919046
NCBI-ProteinID:
XP_068618110
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MSLNNWNKHDRNWNRNKKFQRSQIPPNLKGRDIGLYFKNLHSQRKQEMSKDMVISLKIPN
PVILSVRNNLQQILFLAKKQDIELPEIVTSSYPKLLIEEVPVKNKDSAQNLENFNENNME
EINKPEENIENMDTQSIKNEPSTSTPHMNSIKSEKPIHFINNIQQFNQNSSSYKYAYDDI
ITGTFDEKLVKCLSKGVSINYKDKNISDLSFRFQIEYKDMTTRSNYKKFLKFREILPTYK
KSEDILNLVKNNQVIVVSGETGSGKSTQIPQIILDDAIKNNRGANTKIMVTQPRRIAASS
LAARVAQERCEKIGNSVGYAVRLERKEERPRASIQYCTTGVLLVELEMSQGLTDFSHIIL
DEVHERDSHVDLAMCMLKQILKRRQDLKLILMSATLDAESLSVYFDNAPVMKIEGIAYPV
KDVYLEEILRITQFKLPSVQKPKNRPKWHKFVKNLNKPNDMEKDIKYKAEIAPWLESQKY
KLDHDVYKTLQDVRIEELNLQLLLELLKYICRGDPGAVLIFLPGISEISRFMRMMNESNF
FPSDRFEIYPLHSKLPSLEQHKIFEKPPNNIRKIIIATNIAETSITIDDIIYVIDSGKIK
LNGFNVKENIATLKTEWVAQANLRQRRGRAGRCQPGICYHLLTTYRASKLQERLLPELQR
SNLLEAVLSVKRLRLGLAAHAFSILPSPPHPSTVEWAVKHLQQCGALDGNETLTPLGWHL
ARLPVHPAAGKLLLLASLFGCLDRAASLAAVWSFKDPFQLVIGKEMEVEQAKRSLTLGEP
SDHIAVSEAILQWEQCGSWQRRRSFAHYHFLSHNTLELLADMKRQLGYNLKQMGFLPSGD
VKSPWENRNASNLSLFKAIVAAALYPNIASVRWLNLNARNRPIRIQAFTPEEGKTSVHPS
SVMAPPKNPKAYCGRPVCNSPGANWLVYWLKQHSSELFLLDVTLIYTLPLLFFGEFIFSE
VEEKNSDECYLSIKTVKVKCKKESADLLCKLRSLLDLVLANKVTTSDHTNTHTLFEEEVI
TAVINLITAEDERAVYMGDDVSESDSDDEPIK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaaacaattggaataaacatgatcggaattggaatcgtaataaaaaatttcaa
aggtcacaaataccacctaatttaaaaggacgtgatattggcttatactttaaaaatcta
catagtcaaagaaaacaggaaatgtctaaggatatggttatctcactaaaaattccgaac
cctgtaatattatctgtaagaaataatttacaacaaatactatttcttgccaaaaaacaa
gacattgaattaccagaaatagtaacatcttcatatcctaagcttctcatcgaagaagtt
ccggttaaaaataaagacagtgcacaaaatcttgagaattttaatgaaaacaatatggag
gaaataaataaaccagaagaaaatatagaaaatatggatactcaatctattaaaaatgaa
ccaagtacttctactcctcatatgaattctattaaaagtgaaaaacctattcattttatt
aataatatacagcagttcaaccaaaattcctcatcttataaatatgcatatgatgatata
ataacaggcacttttgatgaaaaacttgtaaaatgtttatctaaaggagtaagtataaat
tataaggacaaaaacataagtgatctaagctttagatttcaaatagaatataaagatatg
accaccagaagtaattataaaaaatttctgaagtttcgagaaattttaccaacatacaaa
aaatctgaagatattctaaatcttgtaaaaaacaatcaagttatagttgttagtggtgaa
actggcagtggaaagtcaacacaaataccacaaattatattagatgatgctataaagaat
aatagaggtgcaaatacaaagatcatggttacccaaccaaggagaatagcagcttcttct
cttgcagctagagttgcacaagaaagatgtgagaaaattggaaattctgtaggatatgct
gttagattagaaagaaaagaagaaagacctcgcgctagtattcagtattgtactacaggg
gtacttttggttgaattagaaatgtcgcagggtttgactgactttagtcatataatttta
gatgaagttcatgaaagggattctcatgtggatttggctatgtgcatgttaaaacagata
ttaaaaaggagacaggacttaaaacttatattaatgagtgccactttagatgctgaaagc
ctttccgtatattttgataatgcaccagttatgaaaatagaagggatagcttatcctgtg
aaagatgtttacttggaagagattttgcgaataacacaatttaaactaccttcagtgcag
aaaccaaagaaccgtccaaaatggcataagtttgtgaaaaatctcaacaaaccaaatgat
atggaaaaagacataaaatacaaggctgagattgcaccttggttagaatcccaaaaatac
aaacttgatcatgatgtttataaaacactgcaagatgtgagaatagaagagttaaatcta
caattattgttggagcttctgaaatacatctgcagaggggacccgggcgctgttcttatc
ttcttacctggaatcagtgaaatatcccggtttatgagaatgatgaatgaaagtaatttc
tttccttcagaccgctttgaaatttatccattgcactcaaaactgccttcactagaacag
cataaaatatttgagaagccaccaaataatattcggaaaattataatagctacaaatata
gccgagacttcaataactattgatgatattatttatgttattgattctggcaaaattaaa
ttaaatgggttcaatgtgaaagaaaatattgcgacactaaagactgaatgggtggcacaa
gcaaatttacgtcaaagacgtggccgtgctggccgatgtcaacctggtatatgttaccac
ttattgacgacatatcgagcatcaaagctgcaggaacgactattacctgagttgcaaagg
agcaatttattggaagctgtgctaagtgttaagagattgcggctagggttagcagcccac
gcttttagcatcttgccgtctcctccacatccttccacggtggaatgggctgttaagcat
ttgcaacaatgcggcgcattggacggaaacgagactttgacgcctctggggtggcactta
gctcgacttcctgtacacccagctgccggcaagctgttgttattagcctctctttttggc
tgtctcgaccgtgctgcaagtctcgccgccgtgtggagcttcaaggatccctttcaactt
gtcattggaaaagaaatggaggtagaacaagcgaaacgtagtctgacgttaggggaacct
agcgatcatattgcagtatcagaggcaattttacaatgggagcaatgcgggtcgtggcaa
cggaggcgctctttcgcacattatcattttctttcacacaatacattagaactcttggct
gacatgaaaaggcagttaggttacaacctgaagcaaatgggattcctaccctcaggcgat
gtaaaatctccgtgggagaacagaaacgccagtaacttgagtctctttaaggcgatcgtg
gctgctgctttgtatccaaatatagcttcagtaagatggttaaacttaaatgcaagaaat
cgacctataaggattcaagcatttacccctgaagaaggtaaaacatctgttcatcccagt
agcgtaatggcgccacccaaaaacccaaaagcctactgtggaaggccagtgtgtaacagt
ccaggagccaactggctggtgtactggctgaaacaacattcttctgaactttttctacta
gatgtgacgttaatatatacattacctcttttattcttcggagaatttatatttagcgaa
gtggaagaaaagaactcggatgaatgttacttatcaataaaaacagtaaaagtgaaatgt
aagaaggaatctgctgatcttctgtgcaaattgaggtcgttgctagacctggtgttagct
aacaaagtgactacatctgaccatactaatactcatactttgtttgaggaagaagtgatc
accgctgttattaacctaataacagcagaagatgaacgagctgtttatatgggtgatgat
gtttcagaatctgattctgacgatgaaccgattaaataa
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