Battus philenor (pipe-vine swallowtail): 137919157
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Entry
137919157 CDS
T10485
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
bphi Battus philenor (pipe-vine swallowtail)
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bphi04147
]
137919157
00535 Proteoglycans [BR:
bphi00535
]
137919157
00536 Glycosaminoglycan binding proteins [BR:
bphi00536
]
137919157
Exosome [BR:
bphi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137919157
Proteoglycans [BR:
bphi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
137919157
Glycosaminoglycan binding proteins [BR:
bphi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137919157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
137919157
NCBI-ProteinID:
XP_068618240
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MEFLQFMWLILLFHSTICSANDGLFGSKYPNDIPEYDLLRAIGVPFSNPKTQYFDEGLDG
FPAYGLKPGSDIKSPYRLFMPEKLYAEYSITATVRPANKDGGFLFSVVNPLETVVQLGVQ
LIPSGPGLTNISLLYTDANIYALSQTIASFVVPSFAKKWSRFALRVTTDNVTLFLNCHEF
DTVTVKRNPLELVFDSASTLYVGQAGPLIRGAFHGAFQELKLYGSPSQAEVQCVNTFEEI
GNGSGGDEIDIDNFLVDQEEGDSEGSGRYGTMPPPFPPLPPGLDGYPTRLRGEKGERGQR
GPPGESIRGPPGPPGPPGPPGTPGTVPVHELSGSGDDQIFGEHYVSLGQCGCNSSVILTL
LEKAPELRGPPGPPGLMGIEGRTGAPGIAGLPGVPGERGPTGLRGEKGDRGDIGPRGLEG
QPGPKGEPGVDGRAGSPGPPGLPGPPGPSDYSNFEESLLGSYGGVIGRPGAPGPKGDAGL
PGPIGLQGERGFPGQKGERGQAGQNGAKGERGHAGPQGERGPKGERGSPGHDGRPGLPGA
NGRSAEKGEKGERGMPGPPGPPAPPSASLTAEHAELLHIGHSQIQHEKGGKGEKGEKGIQ
GNDGTPGFPGKDGKAGERGDIGPSGMPGIAGPPGIPGLKGDRGERGPPGPVSITSSGSDI
LTIKGEKGDVGPRGRRGRPGPAGPRGPQGLQGIPGPPGRNGDKGDVGLPGWVGRPGTLGP
PGTPGPIGPKGEKGDPGVNILDVSMFKGEKGERGYDGTPGAKGAPGPPGPPGTSAQRSDA
VQYVPGPPGPPGPPGSPGSPGVSIVGPKGEPGLSYYEEYPSHGSTKFYGKPAFPTAEPKI
HHVDESNNRAVPSAAIFQTTEEMMRLASTSPVGALAYVVEEQALFVKVNSGWQYVLLGSL
VTQSAPPPTATPPAHMLPAASLVHVPHISNLVENSPPVTIMGPTLRLAALNEPLSGNMHG
VRRADYSCYRQARRAGLKGTFKALLTSRIQNLDSTVRYSDRHLPIVNTRGEILFKSFSDI
FDGSGGLMSGSPRIFSFNDKNVMTDSNWPQKLIWHGSHPSGERAVDTFCDEWQTSDPTAR
GMASSLYSHKLLSQERYSCNNHFVVLCIEATSHTNNRKKRDLRRYNNTGLIDDEDYLYNA
EEYQQLLNDIFAQPYRDI
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttacaattcatgtggttgatactactctttcattcgacaatatgctcagcc
aacgatggattatttggatcgaaatatccgaacgacataccagaatacgacttgctccgt
gcgatcggcgtgccatttagtaatccgaaaactcaatacttcgacgaaggtctcgacgga
tttcctgcatacggcctcaaaccgggctccgatatcaagtccccatatcgacttttcatg
cctgaaaagttgtatgccgaatattcgataactgcaaccgttcgtcccgccaacaaagat
ggcgggttcctcttttctgtcgttaatcctttagaaaccgtcgtccaactgggcgttcaa
ctcataccttcaggtcccgggcttacgaatatctctctattgtacacagacgctaacatt
tacgctttatcgcaaacaatagcgtcgtttgtcgtaccgtcgttcgcgaagaaatggagc
cgattcgctttgagggtaacaacagataatgttacgttgtttttgaactgccacgagttc
gatacggtgacagtaaagaggaatccgctagagttggtctttgattcggcatcgacgtta
tatgtgggacaagctggtccacttatccggggagcttttcatggtgcatttcaagaactc
aagttatacggatcaccatcacaagccgaggtccagtgtgtgaatacatttgaggaaatc
ggtaacggcagcggtggagacgagatagacattgacaattttttggtggatcaagaagaa
ggcgattcagaagggtcgggccgttatggcaccatgccgccgcccttccctcctttgcca
ccgggattagacggatacccgacccgactgagaggagaaaaaggcgaacgcggacaaagg
ggtcctccaggggaatctattcgaggtccccctgggcctccaggacctcctggaccacct
gggacaccggggacagtacctgtccacgaactttctggctctggggacgaccaaatcttc
ggtgagcattatgtttccctcgggcagtgcggttgtaactccagcgttattttaactctg
ctggaaaaagctccggaattgcgaggacctcctggaccgcctgggcttatgggcatcgag
ggcagaactggtgcacctggaattgctggactgccaggagtgcctggtgagcgaggtccg
accggattacgaggcgaaaaaggcgacagaggggacattggaccacgaggacttgaagga
caacccggtccaaaaggtgaaccgggagtagacgggagagcaggtagccctggtccaccc
ggcttgcctggtccacctgggccctctgactacagtaactttgaagaatcactattgggg
tcatatggaggagtgataggccgaccgggagcgccggggccaaaaggagacgcgggcctt
ccgggtcctataggattacaaggagaaaggggatttcccggtcaaaaaggcgaaagaggt
caagccggtcaaaacggagccaaaggtgaacgaggacatgcaggtccacagggcgaaaga
ggccctaaaggagaacgcggcagtccaggccacgatggtcgcccaggcttacctggtgca
aacggtcgttcagctgagaaaggagaaaaaggggaacgaggcatgccaggtcctccaggt
cctcccgcacctccttccgcaagccttactgctgaacatgctgaacttttacacatagga
cattcgcaaatacaacacgaaaaaggaggaaaaggcgaaaagggcgaaaagggtattcaa
ggtaacgatggcacaccaggttttccggggaaggatggtaaagcaggtgaaagaggtgat
attggaccatcgggaatgccaggaattgcaggtcctcctggtatccccggattaaaagga
gacaggggagaacgaggtcctcctggaccagtcagcattacttcttcaggatcagacatt
ctaactataaagggagaaaagggtgacgttggacctcgtggaagaagaggcagaccaggg
ccggcgggaccccgcggccctcaaggtcttcaaggtataccaggtcctccaggacggaat
ggtgacaaaggcgacgttggtctacccggatgggtgggtcgaccgggaaccttaggtccc
cctggtacaccaggacctattggtccaaaaggagaaaaaggcgatccaggagttaatatt
cttgatgtatccatgttcaaaggtgaaaagggagaacgtggctatgatggaacgcctgga
gcaaagggagcacctggtccgccgggtccacctggtacctctgcacaaagatctgatgcc
gttcaatacgttcccggtccgccaggtcctcctggacctccaggatcaccgggttctcct
ggagtttctattgtgggtcccaaaggagaaccagggttgagctactatgaagaataccca
tcacatggaagtactaaattttatggaaaaccagcattcccaacggctgaaccaaagatt
catcatgtagatgaaagcaataatagagcagtaccgagtgcggcaatatttcaaacaaca
gaagaaatgatgaggctcgcatcaacaagtccagttggtgcattggcttatgttgttgaa
gaacaagcgctttttgttaaagtcaactctggatggcaatatgttttgctcggttcgctg
gtaacacaatcagctccgccgcctactgcgacgcctcctgcccacatgttgccagcagcg
agtttagtccatgtcccgcatatatcaaacttagtggaaaactctccccctgtcacgata
atgggaccgactttgcgactggctgcactcaacgagcccttgtccggcaacatgcatgga
gtgcgccgagctgattactcctgttataggcaggccagacgcgccggattaaaaggcact
tttaaagctttacttactagcaggatacaaaaccttgattccacggtgcgttactccgat
cgtcatttgccaattgtgaatacccgaggagagattctattcaagtctttttcggacata
tttgacggcagtggaggtttgatgtccggatctccgcgaatatttagtttcaatgataag
aatgtgatgactgattcaaactggccacagaagttgatatggcatggctcacacccaagc
ggagaaagagctgtggatacattctgcgacgaatggcagacaagcgatcccacggcacga
ggaatggcgtcctctctttactcgcataaattgctgtcccaggaaagatactcatgcaac
aaccatttcgtagttctttgtattgaagctacatcacacacgaacaacagaaaaaaacgc
gatctacgaagatacaacaatacaggtctaattgatgacgaagattatctttacaacgcc
gaagagtatcaacaattattaaatgatatatttgctcaaccttatagggacatttaa
DBGET
integrated database retrieval system
