Battus philenor (pipe-vine swallowtail): 137919261
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Entry
137919261 CDS
T10485
Symbol
Hpr1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03013
Nucleocytoplasmic transport
bphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137919261 (Hpr1)
09122 Translation
03013 Nucleocytoplasmic transport
137919261 (Hpr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137919261 (Hpr1)
03041 Spliceosome [BR:
bphi03041
]
137919261 (Hpr1)
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137919261 (Hpr1)
Spliceosome [BR:
bphi03041
]
Complex C
Other components
EJC/TREX
137919261 (Hpr1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137919261 (Hpr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
DEATH_SH3BP4
Motif
Other DBs
NCBI-GeneID:
137919261
NCBI-ProteinID:
XP_068618384
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MSDKQGFEDLRLMYKDILSKAFSTNNLDLLDSFSKNTNEVDRKAAMDQAFRDKLLELLLE
NPNSLENYVSFCIESCRRHMVTPTMPVVLLGDIFDALTLNKCEKMFSYVENGVHIWKEDL
FFVACKNNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIVSEFNLENVT
EFGGDNSSTLKDSLDEEMVVDDEKSKLAIDYNLYCRFWSLQDFFRNPNSCYNKIQWKTFV
AHSGSVLAAFSSYKLEAVELQKSNLNRVKAVSTDVEMQESNKEQHYFAKFLTNQKLLELQ
LSDSNFRRCVLIQFLILFQYLTSAVKFKMETQDLKSDQTEWVKETTAMVYRLLSETPPEG
KKFSECVKSILRREEHWNNWKNDGCPEFQKPKQPISHDSTDEVKKSRKRRRPVGDIIKEY
ETQEKVYMGNNELTKLWNLCPDNLVACRTKGRDFMPSLESYMVTGAGGARRTSSGGWGWR
ALRLLARRSPHFFVHTNNPIGRLPDYLDDMVKRVTRDMAANAAASHSNGDTSSTSDKTFK
QEPAEEEITEEQMEADLIKGADSNDIEQVPDSTHAGEDEDKSSRSRVTMISPSQLDALAS
KLDDWKKLATKLGYKQDEIQYFETENATNAARAKNMLRLWFDDDEDASVENLLYIMEGLK
LVEACEALKNSK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaacaaggatttgaagaccttcggttaatgtataaggacatattatctaaa
gcattttcaaccaacaaccttgatctcctagattcgttctcaaaaaatacaaatgaagtt
gatagaaaagcagcaatggatcaagcgtttagggataaactcttagagttgctccttgag
aatcctaattccttagaaaattatgtttcattttgcattgaatcctgtcgtagacacatg
gtgacaccaactatgcctgtcgtactactgggggatatattcgatgcactaacattgaac
aaatgcgaaaaaatgttttcgtatgtggaaaatggtgtgcatatatggaaagaagattta
ttttttgttgcgtgcaagaacaacctacttaggatgtgtaacgatttattaaggagatta
tcgcgctcgcaaaacactgtattttgtggaagaattttattatttttagcaaagttcttt
ccgttctcggaaagatcgggactcaacattgtttcggaattcaatttagaaaatgtaaca
gaatttggaggagacaactcaagtactttgaaagattccttggatgaagaaatggttgtt
gatgatgaaaaaagtaaattggctatagattataatttatactgtcgtttttggagcctt
caagacttctttaggaatccaaatagttgttacaataagattcaatggaagacctttgtt
gcacattctggaagtgtgttggcggcattttcatcctacaagctagaagcagtagaactt
caaaagtcaaatttaaacagagtaaaggctgtgagcacagatgtggaaatgcaagagtcc
aacaaagagcaacattactttgcaaagttcctcaccaatcaaaagctgctagaattgcag
ttatcagattccaattttagaagatgtgtgcttatacaatttttaattttgtttcaatat
ttaacatcagcagtaaagtttaaaatggaaactcaagatttaaaatcagaccaaactgaa
tgggtcaaagaaacaactgcaatggtgtatcgtttattaagtgaaacaccaccagaaggt
aaaaaattttcagaatgtgtcaaaagtatattgcggagagaagagcattggaataactgg
aagaatgatggatgtccagaatttcaaaaaccaaaacaaccaatatcccatgattcaact
gatgaagtgaagaagtctagaaaacgaaggagacctgttggagatataattaaggaatat
gaaactcaagaaaaagtttacatgggaaacaatgaactaacaaaattatggaatttgtgc
ccggataatctagttgcttgcagaactaagggacgagattttatgccttcgttagagtcg
tacatggtgacaggcgctgggggagctcgccgcaccagcagcggtggttggggttggcgt
gcgctgcgcctgctggctcgccgctcgccacacttcttcgtgcacaccaacaatcccatt
ggacgtctaccggattacctggacgatatggttaaacgtgttactcgggacatggccgcc
aacgccgcggccagccattccaatggggacacgtccagcaccagcgacaaaacattcaaa
caggagcctgcggaagaagagatcacagaagaacagatggaagcagatctcatcaaagga
gccgattccaatgatatagaacaggtaccagattcaacgcacgccggcgaagacgaggat
aagtcttcacgctctcgcgtcaccatgatatctccgtcgcaactcgacgcactcgcctca
aaactcgacgactggaagaaactagcaacgaaactgggatacaagcaggacgagattcag
tacttcgaaaccgaaaacgcgacgaacgcagcacgggccaagaacatgctccggctctgg
ttcgacgacgacgaggacgcgtccgtagagaacctcctgtacatcatggagggtctgaaa
ctagtagaggcttgcgaggcgcttaaaaactctaaatga
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