Battus philenor (pipe-vine swallowtail): 137919644
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Entry
137919644 CDS
T10485
Symbol
tst
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137919644 (tst)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137919644 (tst)
Enzymes [BR:
bphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137919644 (tst)
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137919644 (tst)
mRNA degradation factors
3'-5' decay
Ski complex
137919644 (tst)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_N
DEXQc_Suv3
Helicase_C
MTR4_beta-barrel
ResIII
MTR4-like_stalk
ATPase_2
Motif
Other DBs
NCBI-GeneID:
137919644
NCBI-ProteinID:
XP_068618872
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MSLQLEDEFSDFKIPPIFEDLNDRVKEYLLNPERLSIHKWEKSQNHWHRKTDVDSLIKFQ
DEDISLDTTLEVLRDPITGEIVGVEEVSIPREDDDDNLSMTRAPLPPSLATRGTTTQNPF
IPAGFEDELQKLLDDAAQCDEIKFNLEDDEPGKFLGEDLLTTPPGSKENVLFEKDGFTLL
KTSDISNEEKILTKEEIVKIVNINLEEVVENNLHLVDLWKDDEESKPNVTKIVKPKNIDL
DSDTVEDDNFLENTIIQPPIELPEIPVLNITSSKGRMAVTSTDWAEMIDVTLPVPDFREK
IKDMAHSYPFELDNFQKQAIIKLEEGHHVFVAAHTSAGKTVVAEYAIAMSRRNCTRSIYT
SPIKALSNQKYNDFNKLFGEVGLLTGDLQINATASCLVMTTEILRSMLYCGSDVTRDLEF
VIFDEVHYINNAERGYVWEEVLILLPAHVSIVMLSATVPNTLQFADWVGRTKKRKVYVVS
TPKRPVPLCHYLYTGTGGKSKNERFMIVDQESNFLLRGYNDAVAAKKSRENEYKKNFGPK
GAKQYMNPKAEQTMWVAFIDHLKQSDKLPVVAFTLSRNRCDQNAENLMSVDLTTAKEKGH
IRNFFQKCLQRLKKPDRILPQVIRLQRVLENGIGVHHSGILPLLKEIVEMLFQTGFVKIL
FATETFAMGVNMPARTVVFDNITKFDGVQSRHLMPAEYIQMAGRAGRRGLDDTGTVIILC
KEEVPNQIKLKEMMLGTPEKLSSQFRLTYAMILSLLRAATVSVEGMMQRSFREFHQICQA
DNNRKQLQIAEKEYSEKCSTPLAAHLTPLASFYDTAASYIDVLNDIMPILLGQSKVIKEF
VPGKILILSAGAYINQLGIYLNSSGPRQTPYKVLVLNTVENDPNKYNFEIDESWFRMLSF
SAMYDGIGTEEGTLDHTILCIAPKNIIAVTKMSLKIDPNLIIQDWDKRQIPRFKDAPIGS
SCASAVQELSRLSHAVRTGATVLERVSLTQSLTITTGEVLQSLDKMNKFKLMLESQKKST
DIANFKAEFAIVYERKQAERKRDKYKRLLSFENLALYPDYQRRLLVLKELNYIDEHDSVI
LKGRVACGMGTNELIISELVFRNVFTDKNPAEIAALLSCFVFQAKTNVDQPLTDKLKEGV
EAIKVIDEDLSAIESKYLVSQFEGQAERLNFGLIRVVYEWALEKPFAEIMDLTDVQEGII
VRCIQQLHELLIDVKDAAVAIGDPNLQTKMMEASTAIKRDIVFAASLYTSARETITL
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcaactagaagatgagttttcggattttaagataccaccgattttcgaagat
ttaaacgaccgcgtgaaggaatatcttttaaatcctgaacgtctttctatacacaaatgg
gaaaagtcgcaaaaccattggcacagaaaaacagacgtcgattccttaataaagtttcaa
gatgaagacatcagccttgatacaacacttgaagtattaagagacccaataactggagaa
attgttggtgtggaagaagtgagcataccaagagaagatgatgatgataatttatcaatg
acacgagcacctttgccaccaagccttgcaacaaggggcaccacaacacaaaaccctttc
atacctgcaggttttgaagatgaattacaaaaattgttagatgatgcagcacagtgtgac
gaaatcaaatttaatttagaagatgatgaaccaggaaaattcttaggagaagatctctta
actacaccaccaggaagtaaagaaaatgttttatttgaaaaagatggtttcactttgttg
aaaacaagcgacattagtaatgaagaaaaaatattgaccaaagaagagattgtgaagata
gttaatataaaccttgaagaagtggtagaaaataatctgcatttggttgatctttggaaa
gatgatgaagaaagcaagcccaatgttactaaaatagtaaagccaaaaaatattgaccta
gacagtgacaccgtggaggatgataatttcctagaaaatacaataattcagccacctata
gagctaccggaaattccggtattaaatattaccagttctaaggggagaatggcagttaca
tcaaccgattgggcagagatgatcgatgtcactcttcctgtacctgatttcagagaaaag
ataaaagacatggcgcattcatatccatttgaattggacaatttccaaaaacaggctatt
ataaaactagaagaaggtcaccacgtcttcgtagctgctcatacttcagctggaaagaca
gttgtagccgagtatgcaattgcgatgtccaggagaaattgtacaagatcaatctacaca
tctccaatcaaggcgctgtcaaatcaaaagtacaatgatttcaacaaattatttggtgaa
gtaggcctgctcacgggagacctacaaatcaatgcaaccgcctcctgtcttgttatgact
acggagattttacggtccatgctttactgtggctctgatgtcacaagagatcttgaattt
gttatatttgacgaagtgcattacataaacaatgctgagcgaggttatgtatgggaagaa
gtacttatattacttccagcccacgtaagcattgttatgttgagtgcaactgtacccaat
acactgcaatttgcagattgggtgggacggactaaaaagcgaaaagtgtatgttgtctcc
acaccaaaaagacctgtaccgctctgtcactatttgtatacaggaacgggaggtaaatct
aaaaatgaaagattcatgatagttgatcaagaaagtaactttttattgagaggatacaat
gacgcagttgctgcgaaaaagtcacgagaaaacgaatacaagaaaaactttggacctaaa
ggtgcaaagcaatacatgaatcctaaagcagagcaaacaatgtgggtggcattcatagat
cacctaaagcaatcggataaactacccgtcgtagcttttacgctatctcgcaacaggtgt
gaccaaaatgcggagaatttgatgtcggtcgatctcacaacggccaaagagaagggacat
atccggaactttttccaaaaatgtttgcaaagactgaagaaaccggataggatattgcca
caggtaataagactacagagagtcctcgaaaatggaataggcgtacatcacagtggcata
ttgcctttactgaaagaaatcgtggaaatgctttttcaaactggattcgtaaaaatatta
tttgcgacggagactttcgcaatgggtgtgaacatgccggcacgtacggttgtgttcgac
aacataacgaaatttgacggcgtacagagccgccatcttatgcccgctgagtacattcaa
atggcgggccgcgcaggcagaagaggccttgacgatactgggactgttataatactctgt
aaagaggaagtaccaaatcaaattaaattgaaggaaatgatgttgggtacaccggaaaag
ctttcgtcacagttccgtcttacatacgccatgatactcagtttattaagagcagcaaca
gtatcagtggaaggcatgatgcaacgctcattccgggaattccatcagatttgccaagcg
gataacaacagaaaacaacttcaaatagcggaaaaagagtacagtgagaaatgtagcact
cctctagccgcccacctaactcctctcgcaagcttctatgatacagctgcttcatatata
gacgtgttgaatgacatcatgcccatactccttggacaatctaaagttattaaagaattt
gttcctggtaaaatcctcattttatctgcaggcgcctacattaatcagcttgggatttat
ctaaacagctccggtcctagacaaacaccgtataaggtacttgtgttgaatacggtcgag
aacgaccctaacaaatataacttcgagattgatgaaagctggttcaggatgctcagtttt
tcggcaatgtacgatggcataggtaccgaagagggcacattagaccatacaatactctgc
attgctccaaagaatataattgccgttactaaaatgtctttgaagatagatcctaacctg
atcatacaagactgggataagagacaaattccaagatttaaagacgcgccaataggatcc
agctgcgcaagcgcagtgcaggagctgtcgcgtttgtctcacgctgtacgaacaggggcg
actgtactggaacgtgtcagtctcactcagtccctcaccatcaccactggagaagtatta
cagtcactcgacaagatgaacaagtttaagcttatgttagaatctcaaaagaaatcaacg
gacatagcgaacttcaaggcggagtttgcaatagtgtacgaacgaaagcaagcagagaga
aagagagacaaatataaacgactcctatcattcgagaatttggctttgtacccggactat
caaaggaggctacttgtgcttaaagaattgaattatatagatgaacatgacagcgttata
ctaaaaggcagggtcgcttgtggtatggggacgaacgaattgattatatctgagctagtg
ttccggaatgttttcaccgataaaaatcccgctgaaattgctgcgctattgagctgcttt
gtgttccaagcgaagacgaacgtcgaccagccgctcaccgataagttgaaagaaggtgta
gaagcaattaaagttattgacgaagacctgtctgcgattgagtctaagtatttggttagt
caatttgaagggcaagcagaaaggttaaactttggcttgataagagtcgtctatgaatgg
gctttggagaaaccattcgctgagataatggacttaactgatgttcaagaaggaattatt
gtaagatgcattcaacaactacacgagttattaatagacgtgaaggacgcagctgttgct
attggtgatcctaatcttcaaaccaaaatgatggaagcctctactgccattaaaagagac
atcgtttttgccgcgagtttgtacacttctgcgagggaaactattacattataa
DBGET
integrated database retrieval system
