Battus philenor (pipe-vine swallowtail): 137920177
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Entry
137920177 CDS
T10485
Symbol
Msh6
Name
(RefSeq) probable DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137920177 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bphi03400
]
137920177 (Msh6)
DNA repair and recombination proteins [BR:
bphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137920177 (Msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
137920177
NCBI-ProteinID:
XP_068619538
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MSKRKSVGNTLFNYFTKTPPTNKKLKSNNIDPLADFESNVLNSPKETKVENNKRERQQTP
SPEVEKTLDSSDDDIPVATKKRKRIRLNPVESDDSDVENKSDIKTPSREKNTLHKRLQDS
FKYDPNESPKSNKDIKASVNGQSKGKTKTEEQVETPVLADDGDWAHCKLDWLKPDKIRDA
MKRRPDHPDYDPTTLYVPPDYYKTQTPGHQQWWDMKSAHFDCVLFFKVGKFYELYHMDAA
VGVNELGFSYMKGTFAHSGFPESAYGRMASTLVSKGYKVARVEQTETPEMMQERCKKYGQ
TGKADKVVRREICQVAVRGAQVCGLQDPGPAEAAAVYLLAIAEEERNGSSTYGVCFIDTS
IGRFHLSQFQDDKQSSRLLTTIAHYPPALLVFDRKHTSSRTSKLLATHCHTARSEPMTMW
TPEKTLKTLAEKYYKTNADGDWPEGLKTFLHEGDALGLTPATNCYLAIKALGGCVAFLTD
CLLDIQILDMAQFTTYNPPDIVNTTLSPEVKAQNQWRGGSTMVLDSITLKNLRIVQDEGC
LYDKLNFCSTPMGKRLLYQWVSSPSCNIAVIKERQVAVKTLLENRDLSQEIKNILTTLPD
LERLLAKVHALGNLKKSQSHPDARAIFYEEKTYSKRKVLDFISVLQGFTAALKLTDLFSD
TESVLLKKVTQLPPDGKFPDYRETLKFFKEAFNQQEAEKEGRILPGQGVDQEYDNILSNI
QEIEEELKEYLVEQEKYFRCRLKYVGTDKKRYQLEVPQSNASKAGSEYYLEGARKGFKKF
STAETKDFLSRMIAAEEQKTNVLKDLSRRIFEKFSSHYNEWEAAVQCLATLDILLAFAEF
AQQQSGDICLPEITSDNTKMPYIKIVKGRHPCIPIVNEFIPNDTELGADGASLMLLTGPN
MGGKSTLMRQVGLLTVLAHLGSYVLAQECSLSLVDRIFTRLGASDDILSGQSTFLVEMNE
TAAIVKHATVHSLVLLDELGRGTSTYDGTALASAVCSALAGRGCRAVFSTHYHALVRYLA
SEPGLQLGHMACMVETDETTLDNEDDIPEETITFLYKLTPGACPKSYGFNAARLAGIPRD
ITKRAQLISRNLEKEATCARAFRDIFKKETNPNDLRQLLSTLSI
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagaaaaagtgtggggaatactctttttaattatttcactaagactccacct
acaaacaaaaaacttaagtcgaataacattgatcctctcgcagattttgaatcgaacgta
ttaaatagtcccaaagaaacaaaagttgaaaacaataaaagagaaagacaacagacgccg
tctcctgaagtagaaaaaacactcgatagcagcgatgatgatattcctgttgcgactaag
aagagaaaaaggattcgtctcaatcccgtggagtctgatgactctgatgtggagaacaaa
agtgacattaaaacaccatctagagagaaaaatactttacacaaaaggctccaggatagc
tttaagtatgacccaaatgagtcaccaaagagtaacaaagacatcaaagcttctgttaat
ggacagtccaaaggtaaaacaaagacagaagaacaggtggaaacaccagtgctggcagat
gatggtgattgggcacactgtaaattagattggcttaaacctgacaagatccgagatgct
atgaagaggaggccagatcaccctgattatgatcccacaacactttatgtacctcctgat
tattataaaactcaaacaccagggcatcagcaatggtgggatatgaaatctgctcatttt
gattgtgtattgttctttaaagttggtaaattttatgagctctatcatatggatgcagca
gttggtgttaatgaactaggattctcatacatgaagggtaccttcgctcactcaggcttc
cctgagagtgcatatggacgcatggcatcaacattggtatcaaagggatataaagttgct
agggtagagcagaccgaaacaccagaaatgatgcaggaaaggtgtaaaaaatatggacaa
accggcaaagcagataaagtggtgcggcgtgagatatgccaggtggcggtacgcggagca
caggtgtgcggcctgcaggatcctggaccagctgaagctgctgcagtatacttgttggcc
atagctgaagaggagagaaatggaagcagtacatacggagtatgctttatagatacttct
atcggtcggttccaccttagccagtttcaagatgacaagcaatcttcgagattactgaca
actattgcacattatccacctgcattgttagtatttgaccgtaaacacacaagttcccgt
acaagtaagctattggccactcactgtcacaccgcgcgatcggagcccatgacaatgtgg
acgccggagaagacgctcaagacattggcagagaaatattacaagaccaatgccgatggc
gattggcctgaaggcttgaagacattcttgcatgagggtgatgccttgggtctgactcca
gcgacaaactgttatctcgctatcaaagctctaggaggctgtgtcgctttcctcaccgac
tgtttactggacatacaaatattggacatggcccagtttactacttacaatccaccagac
attgtaaatacaactctgtcgccagaagttaaagcacaaaatcaatggcgaggcggaagc
actatggttcttgattccataactctcaaaaatctaagaattgttcaagacgaaggatgc
ttgtatgataaattgaatttctgctctacgccaatgggaaaaaggttactataccagtgg
gtgagttcaccgagctgcaatatagcagttattaaagagcgccaagtggctgtgaaaact
ttactagaaaatagggacctcagtcaagaaatcaagaatattttaacaacacttcccgac
ttggaaaggcttctagccaaggtacatgctttgggtaatttgaaaaaatcccaaagtcac
ccggacgcacgagctatattctatgaagagaagacttattcgaagcggaaggttttggat
ttcatttcagtgttacaagggttcacagccgctctcaaactaaccgacttgttctccgac
accgagtctgtactgcttaagaaagtaacacaattaccccccgatggaaaattccctgat
tatagagaaacattgaaattctttaaggaagcatttaaccaacaagaggcggaaaaagaa
ggtcgcatactgcccggacaaggcgtcgaccaagagtacgacaatatattgtcaaacata
caggagatcgaagaggagttgaaggaatatctggttgaacaggagaagtacttcagatgt
cgattaaaatatgttggaacagacaaaaaacgatatcagttggaagtgccacagagtaat
gcttctaaggcagggtctgaatattatttggaaggtgcaaggaaaggattcaaaaagttc
tctaccgcagaaactaaggatttcttatctcgtatgatcgccgctgaggaacaaaaaacc
aacgtgctgaaagatttgagtcggagaatattcgagaagttctcgtcgcactacaacgag
tgggaagcggcggtgcagtgcctcgccacgttagacatcctgttggccttcgcggagttt
gctcaacagcagagcggagacatatgcttgcccgagatcacctctgataatacaaaaatg
ccatacattaagattgtgaaaggacgtcatccgtgcattcctattgtgaacgaattcatc
ccgaacgacacggaactgggcgccgatggggcaagcctcatgcttctcacaggtcccaac
atgggcggcaagtcgaccctcatgcgtcaagtcggtcttctcacagttttagcacatcta
ggcagctatgtattggcgcaagagtgtagcctgagcctggtggacaggatatttacgcgg
ctaggcgcttccgacgacatcctgtcagggcagtccaccttcctggtagaaatgaacgag
actgctgcgattgtgaaacacgccaccgtccactcgctggttcttttggacgaattgggt
cgcggtacgtcgacgtacgacggcacggcgctggcttcggctgtgtgttcagcgttggcg
ggccgtgggtgccgtgctgtgtttagcacgcactaccacgcgctagtgcgatacctcgcg
tcagagcccggcttgcaacttggacacatggcatgtatggttgaaactgatgaaaccaca
ctggacaatgaagatgatataccggaggaaacaataaccttcctatacaaattgaccccg
ggtgcctgccccaagtcgtacggattcaacgccgcgcgcctcgcggggatcccccgggac
atcacgaaacgagcgcaactcatatctaggaacctggaaaaggaagccacctgtgctagg
gctttcagagacattttcaaaaaggaaactaaccctaatgatctaaggcaattgttatca
actttgagcatttaa
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integrated database retrieval system
