Battus philenor (pipe-vine swallowtail): 137922018
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Entry
137922018 CDS
T10485
Symbol
Upf2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03013
Nucleocytoplasmic transport
bphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137922018 (Upf2)
03015 mRNA surveillance pathway
137922018 (Upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137922018 (Upf2)
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
137922018 (Upf2)
mRNA cycle factors
P-body specific factors
137922018 (Upf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
137922018
NCBI-ProteinID:
XP_068620947
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MLTTDQNDEKNDDQSEELQSENTEESEKLAVAEYISNLESRIKCKHEMRNENLNCVRPPE
NHFSKLDSGLKKNTTFVKKLKSFSATQIDVLLKDFSSLNLTKYISEVAAAITEAKLKMSD
ISAAISLCSALHRTYADFSANLFENWQKILSFKPTDKITNSSKLRVDLRFYAELVAVGIF
TNKTGLPLLGNVLTVLINMDREDHNNISILLSFCKHCGEDYAGLVPKKIKDLAEKYSITI
PRNTFLPAEKQSVVRTLLKDYFLSLTKHLLGERAQLQALHQANQRTLHTRGELSQERKDQ
LEQHQATYDKLLAGAQNFAEVLGEELGEAGEPPTLSLTVIETQGTVTIGGNEEITMQAGT
DPWQDEDTRTFYTSLPDLKVFMPNYQLKETVKSKAETVTEEMLDEDLKEDELSDNEELPP
TVPDVEQEESQPANVSNKYALDAFVNELPNCINRELIDNAAVDFVMNLNTKNNRKKLTRV
LFSVARTRLDLLPFYSRFAAILYPVLPDVCVDLCQMLKQDFKYHVRKKDQINIESKIKVV
RFIGELVKFGLYSKMEALYCLKVLLHDFKHHHIEMACNLLETCGRYLYCNPDTHQRTMIY
LQQMMRKKTVSALDSRYVTQIENAFYYVCPPEAPAQPKEEEPPMHQFIRKILHEDLQKSN
EEKILRLMRKLNWDDPEVAAVAIQHLAGGWRVRASARRALARLTAELAIWQEVVAPAVVD
TILEEIRLTMEDPHPRYNQRRIATVRYLGELYNYKLLDSRDVFTVLYSFITFGVTNDHSN
VSPLDPPDNVFRIRLVCALLETCGAYFNSGSSKKRLDYFLVFFQNYYWYKYTDPCWTEIN
KFPIYVKYIYQECLTTLRPKLNLFTSSQQCKDAIEDLRQTLYPELGEEEQNDNDDQGEDS
INDGLDTIMETDDETDNPQLPEESSDEDPVTDNAGNDVNDVQSDDLVLEHRRPLSKPVED
VEFESAFEKMVMENIAERQRENRPQQRDIAVPMTCRQTTKKTYEQLLQGKEGVEFVLMVR
KGTKPQYKSFNAPPELASNLQQQALADKQEMERMKRLTLNISERQEEEEYSAESGGGSGG
SGNPNRGQHVRQKYQHPKGAPDADLIFGPKKFK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaccgaccaaaacgatgaaaaaaatgatgaccaatccgaggaactacaatct
gagaatactgaagaaagtgaaaaacttgcagtagcagaatacatcagtaatcttgaatct
agaataaagtgtaaacatgagatgagaaatgagaacttaaattgcgtacggcctccggaa
aatcatttttctaagttagattccggtttgaaaaagaacacaacatttgttaagaaattg
aaatctttcagtgctactcagattgacgttcttcttaaagattttagctcactaaatctt
actaagtatatatcagaggttgctgctgctattactgaagctaaattaaaaatgtctgat
atctctgctgctattagtttatgttctgctctccaccgcacttatgccgatttttcagca
aacctctttgaaaattggcaaaagattctttcttttaaacccactgacaaaataacaaat
tcttctaaactgagagtagatttaagattttatgcagaattagttgctgttggaatattc
acaaataaaactggtttacctttactgggaaatgttttaactgttctaattaatatggat
agggaagaccataataatatttcaatacttctttccttctgtaaacactgtggtgaagat
tatgcaggtcttgttccaaaaaaaattaaggacttagcagagaaatatagtattaccatc
ccacgaaatacatttctaccagcagagaagcagagtgttgtgagaacacttctgaaagat
tatttcttatcacttaccaagcatctacttggtgaaagagcacaacttcaagcattgcat
caggcaaaccaaaggacattgcacacaagaggtgaattatcacaagaaaggaaagatcag
ctagaacaacatcaggcaacatatgataaattattagctggagcacaaaattttgccgaa
gtacttggagaagaattgggagaggctggagagcctccaacattatctctaactgtaatt
gaaactcaaggtacagtaactataggaggaaatgaagagattacaatgcaagctggtact
gatccatggcaagatgaagataccagaaccttctatactagtttaccagatttaaaagtt
tttatgcctaattaccaattaaaagagacagtaaagagcaaagcagaaacagttacagaa
gagatgttggatgaagacttaaaagaagatgaactaagtgataatgaagaactaccccca
actgtgcctgatgttgaacaggaagaatcccaaccagccaatgtttcaaataaatatgca
ttagatgcctttgttaatgaactaccaaattgtataaacagagaactgatagacaatgct
gcagtagattttgtaatgaatctcaacacaaagaacaacagaaaaaagctaacaagagtt
ttgtttagcgtggccagaacaaggcttgatttattgcctttctattcaagatttgctgct
atattatatccagttctacctgatgtatgtgttgacctgtgtcaaatgttgaagcaggac
tttaaatatcatgtccgtaaaaaagatcaaattaacatagaatcaaagataaaagtggtt
agattcattggagagttagtcaaatttggtctttattcaaaaatggaggctctgtactgt
ttaaaagtacttctgcatgattttaaacaccatcacattgaaatggcatgcaatcttttg
gaaacatgtggtagatatctgtactgtaatcctgatactcatcaaaggactatgatatac
ctacaacaaatgatgaggaaaaagacagtttcagctttagattctcggtatgtgacacaa
attgaaaatgcattttactatgtttgtccacctgaagcaccagcacaacccaaagaagaa
gaaccaccaatgcatcagttcataagaaagattttacatgaagatttgcaaaaaagtaat
gaagaaaaaatcctcagactaatgagaaagcttaattgggatgaccctgaggtagctgct
gtagctatacaacatttggctggtggatggagagttagagccagtgcaagacgagcacta
gctcgattgactgcagagctggcaatttggcaagaagttgtagcccccgcagtagttgac
acaattcttgaagaaatccgtcttacaatggaagatccacatcctagatataatcaaaga
agaatagctactgtgagatatctaggagagttgtacaattacaaattactagattctaga
gatgttttcactgttttgtactcttttattacatttggtgtgactaatgaccatagtaat
gtatctccgctagacccacctgataatgtgttcagaataaggctagtttgtgctttactt
gagacatgtggtgcatactttaatagtggatctagtaaaaaaagattggattatttctta
gtatttttccagaattactactggtataaatatactgatccatgttggactgaaataaac
aagtttcctatatatgttaagtacatatatcaagaatgtttgacaacattaagaccaaaa
ttaaatctatttacaagttcacagcaatgtaaggatgctatagaagatctaaggcaaaca
ctttatccagagcttggagaagaagagcaaaatgataatgatgaccaaggagaggatagt
attaatgatggactggatacaattatggaaactgacgatgaaacagataatccacaactt
ccggaggaaagttcagatgaagacccagttacggataatgcaggcaatgatgtgaatgat
gtacaaagtgatgacctagttttagaacatagacgtccattatcaaaaccagttgaggat
gtggaatttgaaagtgcttttgaaaagatggtgatggaaaatatagcagaaagacagcga
gaaaatcgaccacaacaaagagatattgcagtccctatgacatgtagacagactacaaag
aaaacttatgaacagcttttacaaggtaaagaaggggtggagtttgttttgatggttaga
aaagggactaaaccacaatataaatcatttaatgcaccgccagaacttgccagtaatttg
caacaacaagcgctggctgacaagcaggaaatggagaggatgaaacggttaaccttgaac
atttctgaaagacaagaagaagaagaatatagtgcagaaagtgggggaggatctggtgga
agcggtaatccaaacagaggacagcatgttcgacaaaaatatcaacatccaaaaggtgca
cctgatgctgatttaatatttgggcccaaaaaatttaaatga
DBGET
integrated database retrieval system
