Battus philenor (pipe-vine swallowtail): 137922134
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Entry
137922134 CDS
T10485
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137922134 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137922134 (fand)
03041 Spliceosome [BR:
bphi03041
]
137922134 (fand)
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137922134 (fand)
Spliceosome [BR:
bphi03041
]
Complex B
Other components
Prp19-related factors
137922134 (fand)
Complex C
137922134 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_15
TPR_12
TPR_8
Mad3_BUB1_I
NRDE-2
TPR_10
DHR-2_Lobe_A
ARM_TT21
PPR
ARM_TT21_C
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
137922134
NCBI-ProteinID:
XP_068621126
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MPLLDGKEIEIYFSEEDLPYEEEILRNPYSVKHWLRYIEHKKGAPKNEINMIYERALKEL
PGSFKLWYNYLKLRRSQIRGRCITDPSYEDVNNCFERSLVFMHKMPRIWMDYCTFLTDQC
KITTTRKAFDSALRALPITQHHRIWPLYLIFLKKHDIPETAVRVFRRYLKLCPDDTEEYI
DYLTSINKLDEAAVKLAQIVNNENFQSKHGKSNHQLWNELCELISKNPDKIHSLNVDAII
RGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKKMEEVAKKPNPTEDDDIDLELRLARFEYLMERRLLLLNSVLLRQNPHNVAEWHKR
IKLYEGKPHEIIDTYTEAVQTVDPKLAVGKLYTLWVGFAKFYESNDQIEDARLIFEKATQ
VHYAKVDDLASVWCEWAEMEIKHENYEEALKLMQKATVLPSRKVAYHDDNETVQMRLYKS
LKVWSMYADLEESFGTYKSCKAVYDHIIDLKIATPQIIINYGLFLEEHNYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLKRYGGSKLERARDLFEQCLEHCPAEFAKAIFLLYAKLE
EEHGLARHAMAVYERATTAVLPEQMFEMFNIYIKKAAEIYGVPKTRQIYEKAIETLPEEK
AREMCIRFAEMETRLGEIDRARAIYSHCSQMCDPRITSEFWNTWKEFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSSAAQAAGTVSDLAPGIKDGMRMLEAKAAEMAVQSKG
GNILFVRGETQGLKESGDKVLNPDEIDIDEESDNSGDEEVAPVQKKEIPAAVFGSLVPEK
DQ
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgctagatggaaaagaaatagagatttatttcagtgaggaagatttaccttat
gaagaagaaatactgcgaaatccctattctgttaaacattggttgagatacattgagcac
aaaaaaggagcaccgaaaaatgaaattaacatgatttatgaaagagcactcaaagagttg
cccggatcatttaaactctggtataattatctgaagttaaggcggtcccaaattaggggt
cgctgcatcacagaccctagttatgaagatgtaaataattgttttgaaagatcattggtg
tttatgcataaaatgccaagaatatggatggattattgtacatttttaactgatcaatgc
aaaataacaactactcgaaaagcatttgatagtgctttaagagctcttcctattacacaa
catcataggatttggccactttacttaattttcttaaaaaaacatgacattcctgaaact
gctgtaagggtttttagaagatacttgaaactatgccctgatgatactgaagagtatata
gattatttaacttccattaacaagttagatgaagcagctgtaaagttggcccaaatagtt
aataatgaaaactttcaatccaaacatggaaagtccaatcatcaattatggaatgaacta
tgtgaacttatatctaaaaatcctgacaaaattcattctctcaatgtagatgcaataatt
agaggtggcctaagaaggtacactgatcaattaggtcatttatggaactctcttgctgat
tactatgtaaggagtggcctttttgaaagagctagagatatctatgaagaagctatacaa
actgttaccacagtccgagactttactcaagtttttgatgcatatgcacaatttgaagaa
ctcagtttaagtaagaaaatggaagaagttgcaaaaaagcccaatccaacagaagatgat
gacattgatttagaattaagattagcaaggtttgaatacttaatggagagaagattgcta
ttgcttaattctgtccttctccgacaaaacccccataatgtagctgaatggcataaaaga
ataaaactatatgaaggtaaacctcatgaaatcattgatacttacactgaagctgtacaa
acagttgatcccaaattagcagtaggaaaactttatacactgtgggtgggctttgcaaaa
ttttatgaaagcaatgaccagatagaagatgcaagattaatctttgaaaaagcaactcaa
gttcattatgcaaaagtagatgatttagcttcagtatggtgtgaatgggctgaaatggaa
attaaacatgagaattatgaagaagctttaaaactgatgcaaaaagctacagtattacca
agtagaaaggttgcataccatgatgacaatgagactgtacaaatgaggttgtacaagtca
ttaaaagtttggtctatgtatgcagaccttgaagaaagttttggtacttacaaatcatgt
aaagcagtttatgaccatatcattgatttaaaaattgctacaccacaaataataatcaat
tatggacttttcttagaagaacacaactattttgaagaagcttttagggcttatgaaaaa
ggtattgcactattcaaatggccaaatgtatatgatatttggaacacttacctaacaaaa
tttttaaaaagatatggaggttcaaaacttgaaagagctagggatttatttgaacaatgc
ttagaacactgtccagcagagtttgcaaaagccatatttttattatatgcaaagctagaa
gaagaacatgggttagccagacatgccatggctgtttatgagcgtgctacaacagctgtt
cttccggaacaaatgtttgaaatgttcaacatttatattaagaaagctgctgaaatatat
ggagttccaaaaacacgtcaaatatatgaaaaagctattgagacactaccagaggaaaaa
gcaagagaaatgtgtattcggttcgcagaaatggaaactcgtttaggtgaaattgataga
gcaagagctatttattcccattgcagtcaaatgtgtgatccaagaattacatctgaattt
tggaacacttggaaagaatttgaagtcagacatggaaatgaggacacaatgcgtgaaatg
cttagaattaagaggagtgttcaagctacttacaatacacaagttaatatgatgtctgca
caaatgttaagttctgctgcacaagcagctggtaccgtttcagacctggcaccaggtata
aaggatggcatgagaatgttggaagctaaagctgctgaaatggctgtacaaagtaaagga
ggtaatattctatttgtacgcggtgaaactcaaggtcttaaagaaagtggtgataaggtg
ctcaatccagatgagattgatattgatgaagaatctgataatagcggtgatgaagaagtt
gcaccagtgcaaaagaaagaaatacctgctgctgtgtttggtagtcttgtaccagaaaag
gatcagtga
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