Battus philenor (pipe-vine swallowtail): 137922402
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Entry
137922402 CDS
T10485
Symbol
Col4a1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi04382
Cornified envelope formation
bphi04512
ECM-receptor interaction
bphi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137922402 (Col4a1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137922402 (Col4a1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137922402 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bphi04147
]
137922402 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
bphi00536
]
137922402 (Col4a1)
Exosome [BR:
bphi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137922402 (Col4a1)
Glycosaminoglycan binding proteins [BR:
bphi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137922402 (Col4a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
137922402
NCBI-ProteinID:
XP_068621485
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MALHVLWLVTILAPLTEVITQDDRWVDVNDINPNKWPPTDWYGSRNVPPSPPTKYYGLSG
RPDLPPPRPPPSTGSNFAVYDPVTRQRTTAFDRNCTAPGCCVPKCMAEKGSRGFPGVPGP
PGIRGLPGHEGAEGPQGPKGQKGQMGPQGPRGPKGDRGKPGAQGFIGLTGPPGPQGETGI
PGIPGRDGCNGTDGDAGETGPKGSQGPRGIAGPKGDKGDKGEAAHIGRYPKGQKGEPGAD
GMQGNQGPVGPPGPPGLQGPKGNTGPIGPQGFKGDKGAKGSKGQSIQGDKGDRGDRGDKG
PGCPPIVLPSEDNTSAIRGVPGDMGPKGEKGEPGRMGDKGDLGPMGEPGLSGQMGIKGEK
GIRGNPGAIGRDGMYGAPGPMGQKGDRGNDGLAGLPGRPGDKGEPGKDGLPGQRGLKGVQ
GLPGGRTGSRGPPGPQGPRGYIGPAGPKGTDGRPGERGEAGPMGPPGGQGEPGTPGVEGP
AGLKGEKGEPGLDGPQGEIGPRGYDGPVGPQGPRGIKGEDGFSIPGEKGSSGRPGLSGEK
GQKGERGYQGLRGVPGNSTLGTPGSPGEMGAPGDKGDKGSPGIDGIPGSPGSKGDIGGRC
NECMPGGPGAKGDRGSDGYPGERGERGPSGPTGLPGERGADGMNGLPGTPGAPGERGDEG
PMGPPGDKGADALIPSSLIRGPPGDKGIQGLRGLPGPKGERGSDGFKGDRGPIGMPGPKG
DQGNIGPPGADGNPGIPGTPGMPGTKGASIKGEKGIPGDLGEKGDKGFPGRSGKKGEPGM
CPANLQALTKGDRGAQGPPGPQGLPGDVGEKGDQGFAGRTGDKGDMGLPGRQGPVGPRGL
PGPRGEKGEMGSMGFPGTPGETGLRGYPGLPGLKGDKGEIGPSMPGPPGPAGLTGEKGDQ
GPRGLPGIPGNDGPPGPMGLRGEKGDMGLSGRTGVAGFPGQKGEPGPVGPPGIPGVPGVP
GKDGPKGQQGYPGVPGKQGVIGLPGQKGEPGMQGPDGPKGFPGARGRPGPSGYPGLDGMA
GEKGDKGEFGFQGLPGAPGPIGPIGPAGVHGEKGDQGFQGPSGPQGRPGEPGEKGYRGYP
GLPGPKGEPGLAADKGDKGDAGVPGLRGLDGAPGLQGEKGDKGDAGLPGYGLPGLAGEKG
DTGPRGLDGFPGQPGLKGDRGFPGKRGEKGDRGLVGEPGQPGTPGLDGIAGSPGEPGYPG
PIGAKGDKGDRGFSGRDGMDGLKGEQGPLGPVGLPGLRGITGPKGDRGLPGLSINIKGDK
GDTGPQGNPGFMGEKGDRGRDGEQGLQGEKGDRGAVGQKGEMGRIGFIGEKGDMGPIGPS
GISGFTIKGEKGLPGTPGKHGRPGQQGAPGEKGDQGLTGLPGEMGPPGISAPPGPRGEKG
DQGREGLAGPPGFDGSPGLPGLAGIEGQKGDKGEKGATGFGLPGQKGDQGPQGLPGLTGL
KGDKGDRGFDGRAGQTGAMGLQGIKGDRGYPGPPGLLGMTGEKGDKGEAAQFILGAKGEP
GLRGIPGRDGLPGSIGAPGAPGLDGSPGMKGDRGYPGPQGPPGIPGLQGEQGLQGERGET
GRMGLTGIPGAPGAPCVTTDYLTGILLVRHSQSDAVPQCEAGHVKLWDGYSLLYIDGNEK
AHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIMR
YISRCVVCEVPANVIAVHSQTLDIPSCPGGWRELWIGYSFVMHTGAGGQGGGQALASPGS
CLEDFRATPFIECNGEGGTCHHFANKLSFWLTTIEDNKQFAMPERETLKSGRLLERVSRC
SVCIKNTV
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcacgtactttggttggtgactattttggcgcctttgacagaagttataacg
caagatgatcgttgggtcgatgtaaacgacataaacccgaacaaatggccaccaacagat
tggtatgggtctcgaaatgttccaccatccccgcccacaaaatattacggattatcaggg
cggccagacttgccaccgccacgtccaccaccaagcactggctcaaactttgctgtctat
gacccagtaactcggcaacgcacgactgcttttgatcgtaattgtacagctccaggttgt
tgcgtaccaaaatgtatggctgaaaagggttcaaggggtttcccgggcgttcctgggccg
cccggaataaggggacttccgggtcatgagggtgcagaaggtccacaaggaccaaaaggc
caaaagggacagatgggtcctcagggtcctcgtgggcctaaaggcgacagaggtaaacct
ggagctcaaggatttattggactcactggaccccctggtccacaaggagaaacaggcatt
cctggaatacctggtcgtgatggatgcaatggaacagacggtgatgcgggagaaacaggt
cccaagggttcacaaggacctcgaggtatagcaggacctaaaggagacaaaggtgacaaa
ggcgaagcagctcatattggccgatatcctaaaggacaaaaaggagaacccggagcagat
ggaatgcaaggaaatcaaggacccgttggaccgccagggcctccaggtttacaaggacca
aaaggaaacactggtccgataggtccacaaggatttaagggcgacaagggtgctaaaggt
tctaaaggacaatcgattcaaggtgacaagggtgataggggagaccgaggtgacaaggga
cctggttgtcctcctattgtactaccttcagaggataatacgagtgccataagaggtgta
ccaggcgatatgggaccaaagggtgaaaaaggcgaaccaggtagaatgggcgataaggga
gatcttggtccaatgggtgaaccaggcttatcaggacaaatgggtattaaaggagaaaaa
ggcattagaggaaaccctggcgcaattggtagagatggaatgtatggcgctcctggtcct
atgggacaaaaaggagatagaggtaatgacgggcttgcaggtctgcccggacgaccaggt
gacaaaggagaaccaggaaaagatggactcccgggtcaaaggggattaaaaggtgtgcaa
gggttaccaggcgggcgcactgggtcacggggccctccgggtccgcaagggcctagaggt
tacattggacctgcaggaccaaaaggcacggacggaagacccggagaacgtggggaagct
ggaccaatgggccctccaggaggacaaggggagccaggaacaccaggtgtagagggacct
gcaggactaaaaggagaaaaaggcgaacctggtttagatgggccacaaggtgaaataggc
cctcgtggttatgacggccctgttggaccacaaggacctaggggaataaaaggtgaagac
ggattttcaatcccgggggaaaaaggaagcagtggtcgacctggtctttctggagaaaaa
ggtcaaaaaggcgaacggggctaccaaggcctacgtggtgtccctggaaactccacgtta
ggaactccaggaagcccgggagaaatgggtgcacctggagataaaggagataaaggcagt
cccgggatcgatggaattcctggtagtccgggatctaaaggtgatattggcggacgttgt
aatgaatgcatgcccggtggccccggagcaaaaggcgatcgtggttctgatggttacccg
ggagaaagaggggaaagaggaccttctggtccaacaggattaccaggtgaacgaggcgca
gatggaatgaatggattacctggtacacctggtgctccaggtgaaagaggtgacgagggt
ccaatgggtcctcctggagataaaggagccgatgctctcattccatctagcttaataaga
ggaccacctggggataaaggaatacaaggactgcgagggttaccaggaccaaaaggtgaa
agaggaagtgatggatttaaaggtgatcgtggtcctataggtatgcctggtccaaagggt
gatcaaggtaatattggacctcctggagctgatggaaatcctgggattcctggaacgccg
ggaatgcctggtactaaaggagcttcaattaaaggagaaaaaggcataccaggtgattta
ggtgaaaaaggtgacaagggtttcccaggaagatcaggtaaaaaaggagagcctggaatg
tgtccagccaatttacaagcgttaaccaaaggtgacagaggagcacaaggaccacccgga
ccccaaggtttaccaggtgatgtaggtgaaaaaggtgaccaaggttttgcaggacggact
ggggataaaggtgatatgggtttaccaggaagacagggtcctgttggtcctagaggacta
cctggaccgagaggagaaaagggggaaatgggctcaatgggcttcccaggaacacccgga
gaaactggattaagagggtacccaggattacctggccttaaaggagataaaggagaaata
ggtccttctatgccaggccctcctggacctgctggtttaactggagaaaaaggagatcaa
ggaccaagaggattaccaggaatacctggtaatgatggccctcctggaccaatgggacta
cggggagaaaaaggagatatgggattatcaggaagaactggagtagctggctttccagga
cagaaaggtgaacctggtcctgttggtccccctggtataccaggcgtacctggtgttcct
ggaaaggatggtcctaaaggacaacagggataccctggagttcccggtaaacaaggagtt
attggtttaccaggacaaaagggtgaacctggtatgcaaggacctgatggcccgaaagga
ttccctggcgcgcgtggccgacctgggccttccggttatccgggtcttgatggcatggca
ggagaaaagggtgacaaaggagagttcggttttcaagggttaccgggggcgccggggcct
ataggtccgataggcccagctggcgtacatggggaaaaaggtgatcaaggttttcaaggt
ccctccggaccacaggggcgccccggtgaaccaggtgaaaagggctatagaggttaccct
ggacttcctgggcctaaaggagaacctggtttggcagctgataaaggtgataaaggagat
gctggtgtccctggattaagaggtttagatggtgcaccaggtctacaaggagaaaagggt
gacaaaggagacgctggtttaccaggttatggtctcccgggattagcgggtgaaaaaggt
gatacaggaccccgcggattagacggtttccctggtcagccaggactcaagggagatcgc
ggtttcccgggtaagcgtggagagaaaggagatagaggtcttgttggcgagcctggacag
ccaggaacaccgggcttggatggcatagcgggttctccgggtgaaccaggttatccagga
ccaataggtgcaaaaggcgacaaaggagacagaggcttttcaggtcgtgatggaatggat
ggtcttaaaggcgaacaaggaccccttggccctgttggcctcccgggacttcgaggtatt
acaggacctaaaggtgatagaggtttgcccggattatcaataaacataaaaggtgacaaa
ggagatacggggcctcaaggaaatcccggttttatgggagaaaagggagataggggacga
gatggggaacaagggttacaaggagaaaagggtgatcgtggagctgttgggcaaaaagga
gaaatgggaagaattggatttataggagagaagggagacatgggtccgatcggtccatct
ggtatttctggatttactattaaaggagaaaaaggattacctggaacccctggtaaacat
ggacgaccaggccaacaaggtgctcctggagaaaagggtgaccaaggtttaactggtctt
cctggtgaaatgggtcctcctggtatatctgctccacctgggccacgaggagaaaaagga
gatcaaggtcgagaaggacttgctggtccaccagggttcgatggttcacctggtttacca
ggattggcaggtattgaaggacaaaaaggcgacaaaggtgaaaaaggagcaacaggtttt
ggtttacctggtcaaaaaggagaccaggggcctcaaggtttgcccggactaacaggacta
aaaggagataaaggtgatcgaggttttgatggacgagctggtcaaacaggtgctatggga
ttacaagggattaaaggtgatcgaggatatcctggacctcctggtttattgggtatgacc
ggcgagaaaggggacaaaggagaagctgcccagtttattttaggtgcaaaaggagaacct
gggcttcgtggtattcctggcagagatggtcttcccggtagtattggagcccctggtgct
cctggtttagatggtagcccaggaatgaaaggcgatcgaggttatccgggcccacaggga
ccgccgggaatacctggactgcaaggcgaacaaggattacaaggtgaaaggggcgagaca
ggtcgtatgggacttactggtataccaggtgccccaggagcaccatgtgtaacaacagat
tacttaactggtattcttcttgtaagacatagccaaagtgatgcagtacctcaatgtgaa
gctggtcatgtgaaattatgggatggttactctttgctgtatatagacggtaatgaaaaa
gctcataaccaagatttgggatatgctggttcatgtgtgcgcaaattcagtacaatgcct
ttcctattttgcgatctaaacgacgtttgtaactatgcaagtcgaaacgaccgtagttat
tggctttcaacaggacaaccaattccaatgatgcccgtagaaggcaatgaaataatgcga
tacatatctagatgtgtagtttgcgaagtaccagcaaatgttatagctgttcacagccaa
acgctagacattccaagttgtccaggaggttggagagaattatggatcggatacagtttt
gttatgcacacgggagctggtggtcaaggtggcggtcaggctttagcaagccctggatcc
tgcttggaagatttccgcgccacgccttttatagagtgtaacggagagggcggtacttgt
catcattttgctaacaagcttagtttctggcttacgactattgaagacaacaaacaattt
gcaatgcctgaacgtgagacacttaagtctggacgactactagaaagagtgtcgcggtgc
tcagtttgcataaaaaacactgtttaa
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integrated database retrieval system
