Battus philenor (pipe-vine swallowtail): 137923157
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Entry
137923157 CDS
T10485
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8 isoform X1
KO
K18734
protein SMG8
Organism
bphi Battus philenor (pipe-vine swallowtail)
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137923157
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137923157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
137923157
NCBI-ProteinID:
XP_068622411
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MNVFSINDIPEFSKKERIVVVGIIGKSPYRYPNKTTPLLPSVKCEENDIECHWDERGGIL
YLHAMTYLDTKRLVALANDLNEDSKSSVKDADAAHWLVAAGELAMESCKAMTLIFHLCHI
VILSLPTPVFDLGYLQLFEAVDAYRNELLLPTKAALTNAKIGGTWETHGRLCCPRLLFHF
RRAPTPLRKAPAALKRLEHAVEDQLYFKLRKTRIITNVCAKSVFAIPKNEEFVYINTEEE
TGNARDVSSLVRGLVQLCRGEESEAPTERPSFRQFLQGHIDLAFGEGFDDNVGKYAMSTS
FFELPSASSWRKAAQALAPIYLQTSKTEGEKEYSGVLFDTLATDVRFSQARCAKVLPIAQ
ASYTEGLPPFYSSQQHAHKVNVALGELEAMARGPLIGGARTRLRAACAAVWKTRKLCEAP
SLTQHPCIEPEHDSSKEHSSGVRYVSACNCGRHKSTREDPYTVRQANYGFYQQAADDCGV
CNTLQSIDMPVFQPSTPSFRAASVKGANGEELSEAGEAQGASSAGWGGSSGEGEACEGSA
WSPHALSPGSARDDDEAGDGAPSTATTAPATDRDRYDLVPLREEPATEKVMSRQPSTTEY
LPGMLHTASPANLLPAFPSWSLVCLGPSSLYSHSLGLPEHLQPGFLPHTNYLFPWDCSVN
YRSEQTNAWRSSRGRGKPTPQHPLTVKIFIGFEFECPRGHRFMMSSPEGGTGGGVGVPGG
AGGATGGGWARDAAAGARLAHAAVPLQLPCLCRAAPRAHLARAHIVTPKSNVHVTLQPKV
QPIPGGPIFIPHPVGEPPLKLSTSAYWVLRFPYVYCDERGVLPRPRPPAYTTGTLVPPLF
GLQD
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttttcaataaacgatatacctgaattttctaaaaaagagagaatagttgtg
gtcggaattattggaaaatcaccgtatcgatatcctaataaaacaacaccattattacca
tctgttaaatgtgaggaaaatgacattgagtgccattgggatgaacgtggaggtatcctt
tatttacatgccatgacatatttggatacaaaacgtcttgtggcactggccaatgacctc
aatgaagattcaaagagcagcgtcaaggatgcagatgcagcacactggctggtggcagct
ggagagttggcaatggaatcctgcaaagcaatgacattgatctttcacctttgccatatt
gtaattctgtctctgccaacaccagtgtttgatcttggttacctgcaattgtttgaagct
gttgatgcctacagaaatgaattactactaccaacgaaagctgccttaaccaatgcaaaa
ataggaggaacatgggagacccatgggaggctgtgttgtccccgtctgctctttcacttc
cgaagagctccgactccattgcgcaaggctccagcagctctgaaaaggctcgaacatgcg
gtggaggatcagctgtattttaagttaaggaaaacacgaatcatcacaaatgtttgcgca
aaatcagtgttcgcaattcccaagaatgaagagtttgtttacatcaacacagaggaagag
acaggcaacgcacgtgacgtcagctccctcgtccgcgggctggtgcagttgtgcagaggc
gaggagtccgaagcacccactgagaggccctccttccggcagttccttcagggtcacatc
gatcttgcctttggagaaggtttcgatgacaatgttggaaagtatgctatgagtacatca
ttctttgagttacccagcgcgtcatcttggaggaaagccgcacaggcactcgcacccata
tacctgcagacctccaagactgagggtgagaaggaatacagtggggtgctatttgatacc
ctcgcaactgacgtgcgcttctcacaagcccgctgcgctaaggttctgcctatagcacag
gcgtcatatacagagggtttaccgccattttattccagccagcaacatgctcataaggtg
aatgtagcgctgggtgagttggaggcgatggcccggggacccctgataggcggcgcacgc
acacgtctacgcgccgcctgcgcagccgtgtggaagacccggaagctctgcgaagcaccc
tccctcacgcagcacccctgcatagagccggaacacgacagcagcaaagagcactcgtcg
ggcgtgcggtacgtgagcgcgtgcaactgcggccgccacaagagcacgcgcgaggatccg
tacaccgtgcgtcaggccaactacggcttctaccagcaggcggccgacgactgcggcgtc
tgcaacacgctgcagtctatagacatgcccgtattccagccctccacgccctccttcaga
gcggcgtcggtgaaaggtgctaacggcgaggagttgtcggaggctggtgaggcccagggt
gcgagcagtgcggggtggggcggctcctcgggcgaaggggaagcttgcgaaggctccgca
tggtccccgcatgcgctgtcacccgggtcggctcgagatgacgatgaagcgggagacgga
gcgccttccacagcaacaacagctccggcaactgaccgcgaccgctatgaccttgtgccg
ctcagggaggagccagctacggagaaggtaatgagccgccagccgtccacaacggaatat
ctacccgggatgttgcacacagctagcccagctaacttactcccagccttccccagctgg
tcgctagtgtgtttaggaccctcctccctctactcccacagcctgggtctcccggagcac
ctgcaacctggttttcttccccacaccaactatctcttcccatgggattgttcagttaat
tacaggagcgagcagacgaacgcatggcgttctagtcgtgggagaggaaagccgactcca
caacatcctctcacagtcaagatatttataggcttcgagtttgaatgcccccggggacat
aggttcatgatgtcgtcgccagagggcggtaccggcggcggcgtgggtgtcccaggaggt
gccggaggtgcgacagggggcggatgggctcgcgacgccgcagcgggagctcgcctcgca
cacgcggcggtgccgctgcagctgccgtgcctgtgccgtgcagccccgcgtgcacacctc
gcccgggctcacatcgtcacacccaagtccaacgtgcacgtcacactgcagccaaaagtg
caaccgataccgggagggccgatcttcatccctcatccagtcggagagcctcccttgaag
ttgagcacttccgcttactgggtactccggttcccgtacgtgtactgcgacgagaggggc
gtactcccccgtccacgccctccagcatacaccaccggcacactagtgcccccactcttc
gggctccaggactag
DBGET
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