Battus philenor (pipe-vine swallowtail): 137923200
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Entry
137923200 CDS
T10485
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
bphi Battus philenor (pipe-vine swallowtail)
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137923200
Enzymes [BR:
bphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137923200
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137923200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
DEAD
HA2_N
AAA_22
ResIII
AAA_14
Herpes_ori_bp
nSTAND3
AAA_19
SLFN-g3_helicase
AAA_7
Sigma54_activat
RsgA_GTPase
AAA_11
Motif
Other DBs
NCBI-GeneID:
137923200
NCBI-ProteinID:
XP_068622478
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MKRASNHVSQNSSKRRRSNSKDRHITDRYEIKKPTQTECFDREFSFLDYKRDINKIFTYS
NDTNTVTNNLDDFWVFVKKYESTLKKAGKPIFPNEDNSSRDIESTLKFSKFNCINFNTNI
KFMDRVCDEKGRKKLDKNVFEAFLNVVSIYLDFKNKEKLEKLKKLRQTQRDLPVAKYRNE
IQEAVKNEKVVIIAGDTGCGKSTQVPQYLHDAGFQNIACTQPRRIACVSLSKRVAYETLT
QFESKVGYQIRFEKSKSADTKICFITEGLLLRQISSENVPNYDVIILDEIHERHLMGDFL
LGVLKCLVHTRNDIKLVLMSATINIKLFEDYFSSESAVVIQVPGRLYPIDLHYKPILIDE
KPTRDDRLDPQPYVQIMQLIDSKYPCDERGDLLIFMSGVQEITSICDAAQQYADKTKKWI
VLPLHSGLSLIEQDKVFDYPPEGVRKCIVSTNIAETSVTIDGIRFVVDSGKVKEMSYDSS
TKMQRLKEFWISQASADQRKGRAGRTGPGVCYRIYSEQQYSDMEPFSAPEVSRVPLASLL
LMMSSLGVNDVRRFPFLDTPPEQAIENALLELKQHGALSSNEKLTLLGTTLANLPVEVSL
AKALVIGSATLPPHKRDSALALTAALGIKSIFTTRAHRDFECENARKPEESDHGDPITLL
SLYCAWLSVKAEGRGGRDWCRRRGIEEQRFYELTKLAAQLRGLLQDNNLMDGPEPENMSS
AERAMRHGQLKQLKDMRRQYKQKAAEESKRRKRLKVDSWEIVEDKPEDDKVLDIRDIEFR
MTNDAQRIRALISGSSASSGRDLIMLKMVLCRALYPQVAIADEFNHCKSVSEQLYHTWSK
PFVYLHPTSYFGRNPRVVQLCEADINEETPPGYKSKLALSARHQLLCYLSLLETTKPYIV
NSMRMPAAQTLLLLSHSIDTNMGFTRLVCDSWLLLEFPYPETGLNLLLKAAKLRQRWDAL
INQRLTDASPNKSVESELQKSKQISKSTHEELQYELSCDISSYVNCEVVYTIKRLLPGDL
KVLYHGGDDAHPTVEPNPFQQGFECRANEKKGGIYVTDNIVYNCVVDTDWSYQSYQETYE
LPWTCPDCEISLCLSPLERLQHKQFMCSSKTEEKQIKDTKPPRDNRPNVKEYKCDNCNEV
FFMTPVEILKHKKSCKSK
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagcttcaaaccatgtatcacaaaattcatctaaaagacgacgctccaactct
aaggacagacacattacagatcgttatgaaataaaaaaaccaacacaaacagaatgtttc
gatagggaatttagttttttggactacaaacgagacattaataaaatttttacttatagc
aatgacaccaacaccgttacaaataatttggatgacttctgggtgtttgttaaaaaatat
gaatctacattgaaaaaagctggtaaacctatctttcctaatgaagacaattcttccaga
gatatagagagtacattaaaattttcaaaatttaattgcattaattttaatactaacata
aaatttatggatagagtgtgtgatgaaaaggggagaaagaaacttgacaaaaatgtgttt
gaagcatttttgaacgttgtgtcaatatacttggattttaaaaataaagagaaacttgaa
aagttgaaaaagttaaggcaaacacaaagagacctgccagtagctaaatacagaaatgaa
atacaagaagcagtaaaaaatgagaaggtagttattattgctggtgacactggttgtggg
aagtcaactcaggtaccgcagtatctacatgatgctggctttcaaaatattgcatgcact
caaccaagaagaattgcctgtgtgtcattatcaaaaagagttgcatatgaaactctaaca
cagtttgagagcaaagttggataccaaataagatttgaaaagagcaagtctgctgatact
aagatatgttttattaccgaaggattgctgctaagacagatttcttcggaaaatgttcca
aattatgatgttatcatattagatgaaattcacgagagacatcttatgggtgactttctt
cttggagtactcaagtgccttgtacacactcgtaatgatattaaattagtgctcatgtcg
gccacaatcaatattaaattgtttgaagattatttttcctctgagtctgcagttgttata
caagttcctggaagattatatccaatagatttacattacaaaccaattttaattgatgaa
aaaccaactagagatgaccggctcgatcctcaaccttatgttcaaattatgcagttaatt
gacagcaaatatccgtgtgacgaaagaggcgacctcttgatatttatgtccggggtccag
gaaatcacctccatatgtgatgcagcgcaacaatacgcagataaaactaagaaatggatt
gtactaccccttcatagtggtctatctcttattgaacaggataaggtttttgactaccct
ccggaaggcgttaggaagtgtatcgtttcaaccaatatagctgaaacgtctgtgacgata
gatggaattagattcgtcgttgattcaggcaaagttaaagaaatgagttacgattcgtcg
acaaaaatgcaacgactcaaggagttttggatatcgcaagcgagtgctgatcaaaggaaa
ggaagagccggtagaacgggtccgggtgtctgttaccgtatttattccgagcaacagtac
tcggatatggagccattcagcgcgcccgaagtgagcagggtgccattggcgtcgctcctg
ctgatgatgagctcgctgggagtgaacgatgtccgacgcttcccattcctcgatacgccg
cccgagcaggctattgaaaatgcccttctagaattaaaacagcacggggcattgtcttca
aatgaaaaattaacgttacttggtacgactttggcaaatttgccagtggaagtgtcgctg
gcgaaggcgctagtgataggtagcgcaactctgccgcctcacaaacgggactctgccctc
gctcttactgcggctttagggattaaatcaatatttacaaccagagctcacagggacttt
gaatgcgagaatgcgaggaaaccagaagagtctgaccatggcgacccgatcacccttctg
tccctttactgcgcgtggctgagcgtgaaggcagaggggcgcggtggtcgcgactggtgt
cgtcgtagaggcatagaagagcagcgcttctatgagctcaccaagttagctgcacagctg
cgtggcttgttacaggacaacaacttaatggatggtccagaaccggagaacatgtcatcg
gctgaacgagcaatgcgacacggacaactgaagcaactgaaagatatgcggagacaatat
aagcaaaaagcggctgaagaatcgaagcggagaaagagactcaaagtggactcgtgggag
atagtagaggacaagcccgaggatgacaaggtgttggacatacgcgacattgaatttcgc
atgacgaacgatgctcagaggatccgggctttgatatctggttccagcgcttccagcggc
cgtgatctaataatgctaaagatggtattatgcagagcactgtatccccaagttgcaata
gcggacgagttcaatcattgcaagtctgtttcagagcaactttatcacacgtggagcaaa
ccttttgtctatcttcatccgacatcgtatttcgggaggaaccctagagttgtacagctg
tgtgaagctgatataaatgaggagacgccgccgggatacaagagtaaactggccctatcc
gcacgacatcagttactctgctacttatcgctgttggaaaccacgaagccgtacattgtg
aactcgatgcgaatgccggccgcgcaaacgctgctgcttctctctcattccatcgacacc
aacatgggctttaccaggttggtatgtgattcgtggttgctgttggaattcccctacccg
gagacagggttgaatctcttgctgaaggcggcgaagcttcgacagcgttgggacgcgctg
attaaccaaagacttacggatgcaagccccaataagtcggtagagtcggagctacaaaag
tcgaaacaaatttcaaaatcgacacacgaggagttacaatacgagctgtcttgtgacatc
agctcttacgtgaactgcgaggtcgtttatacaatcaaaaggctgttacccggcgacttg
aaggttctgtaccacggcggcgacgacgctcacccgactgtcgaacctaatcccttccaa
caaggctttgaatgccgtgcgaatgaaaaaaaaggagggatatatgtaacagacaatatc
gtttataactgtgttgtcgacacggactggagttaccagagttatcaagaaacatacgaa
ctcccctggacctgtccggattgcgagatatctttgtgtctgtcgccactggaacggctg
cagcataagcaattcatgtgctcttcaaaaactgaggagaaacaaatcaaagacactaag
ccgccgcgcgataataggcctaatgttaaagagtataaatgtgataattgtaatgaggta
ttctttatgacgcccgttgaaatacttaaacataagaagagctgtaaaagtaaataa
DBGET
integrated database retrieval system
