| Entry |
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| Symbol |
Upf1
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| Name |
(RefSeq) regulator of nonsense transcripts 1
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| KO |
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| Organism |
bphi Battus philenor (pipe-vine swallowtail)
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| Pathway |
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| Brite |
Enzymes [BR:bphi01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
137923269 (Upf1)
5.6.2.5 RNA 5'-3' helicase
137923269 (Upf1)
Messenger RNA biogenesis [BR:bphi03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
137923269 (Upf1)
mRNA cycle factors
Common to processing body (P body) and stress granule
137923269 (Upf1)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1027 aa
MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFEFTDFTLPSQSQTQASQHDHGLSSSNQ
VNGIGRPDLSSKVASVANAIAELQFEEEDEALYGSKELPEHACKYCGIHDPATVVMCNIC
NKWFCNGRGNTSGSHIINHLVRAKHKEAALHRDGPLGETLLECYSCGARNVFVLGFIPAK
ADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLISDRAFLSWLVKVPSETEQMRARQVTPQ
QIGRLEELWRDNVDATFQDLEKPGVDEEPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRL
KESQTQEGIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELHKTWSGVGHV
IKVPDNYGDDVGLELKSGAGAPLECTSNFVVDFIWKSTSFDRMQLALRKFAVDDSSVSGY
IYRRLLGHEVEEVLFRVHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTV
TSATIVYQLVRQSGGPVLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESTVSFLA
LHEQARALGSADSELRKLTRLKEEAGELSAADERRYRALRRAAERRLLDAADVVCTTCVG
AGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAG
LSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEDRRLHKIDFPW
PRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQ
RSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRL
NVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERRVLTEGPLSNLKESAIQFAKPKKL
VNAQNPGSHFMSTSMFDAREAMVPGSIYDRARPPRDPLAYVGARVSPHAGVPPAAFPQRS
APRTKRRPPRLSQEPLSQQPPLSLSQGASQPDFSQESTAPDCPSQPDGLLSQDSSYQGGF
RARCSQY |
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| NT seq |
3084 nt +upstreamnt +downstreamnt
atgagcgtcgacgcatatggaccaagttcccaaactctaacgtttttggatacagaagaa
gcggatcttattggagctgatactcaaggctcagagtttgaattcacagattttacactc
ccatctcaaagtcaaacgcaggcatcgcaacacgaccatggactaagttcatcaaaccag
gtgaatggaattggacgtcctgacttaagctctaaggttgctagcgttgctaacgctatt
gcagagctacagttcgaagaagaagatgaagctttgtatggaagtaaagaactacctgaa
catgcatgcaaatactgtggaatccatgacccagccactgtcgttatgtgtaacatatgc
aataagtggttttgtaatgggcgtggaaatacatctggttcacatattatcaaccattta
gtgagagccaagcataaggaagctgctttacatagagatggacctctgggtgaaacctta
ctggagtgttactcatgtggagcacggaatgtttttgttcttggcttcatacctgccaag
gctgattctgttgtagtattactttgtcgtcaaccctgtgcagcacaaagttctctgaaa
gacatgaattgggaccaggaacaatggaaaccactgatatctgatcgtgcatttttgtca
tggctagtgaaggttccctcagaaactgagcaaatgagagcccgtcaagtgacacctcaa
caaataggccgtcttgaagaattgtggcgcgacaatgttgatgcaacctttcaagattta
gaaaaaccaggagtagatgaagaacctcatcaggttctcttgagatatgaagatggttac
caataccagaatatttttggtcctctcgtcaagctagaagctgattatgacaagcggctc
aaagaatcccaaactcaagaaggaattgaagttcgttgggatgtggggcttaacaagaaa
accattgcttatttcacacttgctaaaactgacagtgacatgaagctcatgcatggggat
gaactaagattgagatatgtgggagagctacacaaaacatggtctggtgtaggtcacgtt
atcaaagtgcctgacaactatggtgatgatgttggtcttgaattaaaaagtggtgcagga
gcaccactcgagtgtacctctaactttgtggtggactttatttggaagagtacttctttt
gatagaatgcagcttgctcttcgcaaattcgctgtagacgattcgtcagtctctggatat
atttatcgtcgcctccttggccatgaagtagaagaagtgctttttcgcgtgcatctaccg
aagcatttcagtgcacctaatctacctgacctcaatcgctcccaggtctatgctgtaaaa
catgcgcttcagcgccctttgtcccttattcaaggtcccccaggaacaggaaaaactgtt
acatcagctactattgtttaccaacttgttaggcaaagcggagggcctgtgctggtttgt
gcgccatctaatacggctgtggatcagttaactgaaaaaatacatagaactgggctgaaa
gttgtccgattatgtgcaaagtccagagaagctatggaatcaacagtatcattcctagca
ttgcatgaacaagcacgtgccttgggctcggccgattctgaattgcgaaaattaacaaga
ttgaaggaagaagcgggtgaattgtcggccgcggatgaaaggagataccgtgcgttacgg
cgcgctgcggaaagacgtttgttagatgcagctgatgtagtttgtaccacttgtgtgggt
gcaggagacccaagggttgcacgaatgcgattccaatccatccttattgatgaaggcatg
caatccacagagccggaatgcatggtgcctgttgtactaggggccagacaactcatcctt
gttggagaccactgccaattgggtccagtggtaatgtgtaaaaaggctgcaaaagcaggc
cttagtcaaagtcttttcgaacgccttgttgtactcggaatacgacctttccgcctggaa
gtgcagtaccgtatgcatccagagctgtcgcgcttcccgtccgactttttctacgaagga
tcgctacaaaacggcgtcagtgctgaggatcgaagattacataaaatagattttccttgg
ccgcgaccagatcgtccaatgttcttttatgtgacccaaggacaagaagagattgcagga
tctggcacatcatacttaaaccgaactgaagctgccaatgttgaaaagttgactacccgt
tttttaaaagccggtgtccgtcctgaacaaattggtatcatcactccttatgagggtcag
cgatcttatcttgttcaacacatgcagtaccagggaagcctgcacgcgaaactttatcaa
gaaattgaagtggctagcgttgatgcgttccaaggtcgagaaaaagatataataatcatg
tcttgcgttcggtcaaatgagcatcaaggcattggcttcttaagtgatcctcggcgcctt
aatgttgctttgactcgtgcgaaatatggtctcattgttgtgggaaacccaaaggtattg
agtaagcaaccgctatggaatcacctgcttgcgttttacaaggagcgccgcgtgttgaca
gaaggcccactgtccaaccttaaagaatctgcaattcaatttgccaagccgaagaaatta
gtaaacgcccagaatccaggttctcacttcatgtctacttcaatgttcgatgcgcgcgag
gcgatggtgccgggctctatatacgatcgagcgcgacctcctagagatccgttggcttac
gtgggggcaagagtgtccccgcatgcaggcgtcccgcctgccgctttcccgcagcggtcc
gcaccgcgcactaaacgccgtcccccgcgcctttcgcaagaaccgctatcgcagcagccg
ccactctcactgtcccagggcgcctcgcaaccagatttcagtcaggaatcgactgcaccc
gactgtccttcccaaccggacgggctgttgtcacaagattcctcgtaccagggcggattc
cgcgcgcgttgcagccagtactga |
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