Battus philenor (pipe-vine swallowtail): 137924076
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Entry
137924076 CDS
T10485
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03013
Nucleocytoplasmic transport
bphi03015
mRNA surveillance pathway
bphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137924076 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
137924076 (Hel25E)
03015 mRNA surveillance pathway
137924076 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137924076 (Hel25E)
03041 Spliceosome [BR:
bphi03041
]
137924076 (Hel25E)
Enzymes [BR:
bphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137924076 (Hel25E)
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137924076 (Hel25E)
Spliceosome [BR:
bphi03041
]
Complex C
Other components
EJC/TREX
137924076 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137924076 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
137924076
NCBI-ProteinID:
XP_068623496
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQTADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQIEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMAGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVRLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacgatgatcttctcgactatgaagatgaagagcaggcagatcagcaaacc
gccgatggagccacagaagcggcgccaaaaaaagaggttaagggatcgtatgtatcgatt
cacagctccgggtttagagattttcttttgaagcccgaaatactaagagctatagtcgac
tgtggtttcgaacatccttcggaagtccaacatgagtgcatcccgcaagcagttctcgga
atggacattttgtgccaagccaaatccggtatgggtaaaacggctgtgtttgtgctagca
acgcttcagcagatcgagccttcggaaaatcatgtttacgttctggttatgtgtcacacg
agagaactggctttccagataagtaaggaatacgagcggttttcaaaatatatggccggc
gtccgagtgtcagttttctttggcggaatgccgatacaaaaagacgaagaggtgctcaaa
actgcgtgccctcacatcgtagtgggtactcccggcagaatactcgctttagttaacagt
aagaaactaaatcttaagcatttaaagcattttatcctcgacgagtgcgacaaaatgtta
gaatctttagatatgagacgcgatgtccaagaaatctttagaaacacgcctcatggaaag
caagtcatgatgttctccgccacattgagtaaagagatccggccagtttgcaagaagttt
atgcaggaccccatggaggtgtatgtagatgatgaagccaaattaaccctgcacggtcta
caacagcactatgtcaggcttaaagaaaatgagaagaataagaagctttttgaactcctt
gatgttttagaattcaaccaagtggtaatctttgtgaaatcagtacaacgatgcatagcc
cttgcacagttgctaacagatcaaaacttcccagctattgggattcatcgcaacatgaca
caagacgagcgtctgtctcgctaccagcaattcaaggatttccagaagagaatccttgtt
gccactaacttgtttggacgtggtatggacatagaaagagtaaacattgtcttcaactat
gacatgcctgaagattctgacacttatctccacagagtcgctagagcaggaagatttggt
acaaagggtctggctataacaatggtttcagatgagaatgatgcaaagatccttaatgaa
gtgcaagacagatttgatgttaacattacggagctacctgaagaaatagaactatcaaca
tatatagagggtcgataa
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