Battus philenor (pipe-vine swallowtail): 137925397
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Entry
137925397 CDS
T10485
Symbol
DNAlig1
Name
(RefSeq) DNA ligase 1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03030
DNA replication
bphi03410
Base excision repair
bphi03420
Nucleotide excision repair
bphi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137925397 (DNAlig1)
03410 Base excision repair
137925397 (DNAlig1)
03420 Nucleotide excision repair
137925397 (DNAlig1)
03430 Mismatch repair
137925397 (DNAlig1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bphi03032
]
137925397 (DNAlig1)
03400 DNA repair and recombination proteins [BR:
bphi03400
]
137925397 (DNAlig1)
Enzymes [BR:
bphi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
137925397 (DNAlig1)
6.5.1.6 DNA ligase (ATP or NAD+)
137925397 (DNAlig1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
137925397 (DNAlig1)
DNA replication proteins [BR:
bphi03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
137925397 (DNAlig1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
137925397 (DNAlig1)
DNA repair and recombination proteins [BR:
bphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
137925397 (DNAlig1)
NER (nucleotide excision repair)
Other NER factors
137925397 (DNAlig1)
MMR (mismatch excision repair)
Other MMR factors
137925397 (DNAlig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
137925397
NCBI-ProteinID:
XP_068624930
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MNIRKLLAISRVVNCVSHSPLNKYRRIWLINKNQPCYTLNARNMSQKSITSFFKITPKKS
SDGAVVSSKEDKLSANNSISEEKSSPVNGKSSSKRIRSESIENVSPKSASRSPSPITSKQ
RTSKRLRSESVEDVSPKSKSKSTSGSPSPVSSEKKKKVKRQRIESSESEADTNKHSEEES
IPVKVEKRLKTYDSPKSKKTKPKAKKIDETNVSSPEDIKNSTDAASPKESKNIKTPKAKK
TPKTKSKSQEESKIKIEKESPSPKTKDTSGKESKNTMSAFLKRESATQKDIEVKEGKVKK
EKASDEADDKTEDSLVPEADYDPGKSKYHPIKDACWKKEQKVPYLALARTLEIIEATSAR
LKMVEILSNYFRSVITLTPEDLLPSIYLCLNQLAPAYEGLELGIAETYLMKAVGQCTGRT
LAQVKSAAQRCGDLGLAAQQARSTQRTMFTPAPLTVARVFAALREVAAMTGQASVNKKIG
KIQSLYVACRHSESKYLIRSLEGKLRVGLAEQSLLQALALAAAATPPAGPRAGCLDVAKQ
MSPEEFKALVDEHAMLVKTTYCECPNYELLVPVLLKEGVRALPDHCRLTPGIPLKPMLAH
PTRGVNEIFTRFEGVQFTCEWKYDGERAQVHVPGAPDSGPSFPDARIFSRNQEDNTSKYP
DVLARLSTLLQPTVHSCVLDCEAVAYDPVAKQILPFQVLSTRKRKDAEASQIKVQVCVFV
FDLLLLNGRALVREPLAERRALLREHFIETPGEWQFAESRDCSTMEEVQQFMEESVRGSC
EGLMVKMLLGENAKYDIARRSHNWLKLKKDYMEGVGDSVDAVVLGAYRGRGRRGGRYGGF
LLACYDPASEQYQTLCKLGTGFSDQDLDTLGEQLDAHRIDAPRNYYSYEASLAPDVWFAA
ACVWEVRCADLSLSPAHRAAHGLVEPDKGISLRFPRFVRVRDDKAPEQATSSEQVAQLYL
AQDQVRNQTKAPRADHEDFY
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccgcaagttgcttgcaattagtagagtagttaattgcgtatcacatagcccc
cttaataaatatcggcggatatggcttattaataaaaatcaaccctgttatacacttaat
gcaagaaacatgtcacaaaagagtattacatcattttttaaaataacccctaagaaaagt
agcgatggcgccgtagtaagctcaaaagaagacaaactaagtgcaaacaattcaatctca
gaagaaaaatcctcacctgtgaatggaaaaagttcatccaagagaattagatctgaaagc
attgaaaatgtgtcaccaaaatccgcctccagatcaccttctccaatcacttcaaaacag
agaacatccaagagattaagatctgaaagtgttgaagatgtgtcaccaaaatccaaatca
aaatccacttctggatcaccttcaccagtcagctccgaaaagaaaaagaaagtgaaaaga
caaagaattgagagttcggagagtgaagcagacactaacaaacattctgaagaggagtca
ataccagtgaaagtggagaaacggctcaagacatatgattcacccaaaagcaagaaaacc
aaacctaaagctaaaaaaatagacgagacaaatgtctcaagtccagaagacattaaaaat
tccacagatgcagctagtcctaaagaatctaaaaacattaaaacacccaaagcaaagaaa
acaccaaaaacgaaatcaaaaagtcaagaagaatctaaaatcaaaattgaaaaagaatct
ccatccccaaaaacgaaagatacaagtggaaaggaaagtaaaaatacaatgagtgctttt
ctaaagagagaaagtgccactcaaaaggacatagaagtgaaggaagggaaggtaaaaaaa
gaaaaagctagtgacgaagcagatgataagactgaggattcattagtgccagaagccgac
tacgatcctggaaaatcaaagtatcacccgatcaaagatgcctgttggaaaaaagaacag
aaggtaccatacctggctctagctaggacattggagatcattgaagcgacttcagccaga
ctgaaaatggttgagatcctgagcaattacttccgatcggtgattaccctgacaccggaa
gatctgctgccgagtatctatttgtgtttgaatcagttggctcctgcatatgagggcttg
gaactgggaattgcggagacgtatctgatgaaggcggtggggcagtgtacggggagaacg
ctagcgcaggtgaagagtgcagcgcagcggtgtggtgatctgggtctggcagcgcagcaa
gcgcgcagcacgcagcgtaccatgttcacgcccgcgcctctgactgtcgcacgtgttttc
gcagcgctgcgggaggtcgccgccatgaccggtcaggcgtcagtgaataagaagatagga
aagatccagtcgctgtatgttgcgtgcaggcattcagagtccaagtacttgataaggtct
ctggagggcaagctgcgtgtgggcctggcagagcagtcgctgctgcaggcgctggcgctg
gccgcggctgccacgccgcctgctggaccacgcgccggttgcctggacgtggccaagcag
atgtctcctgaagaattcaaggccctcgtagacgagcacgcgatgttggtgaagacgacg
tactgcgagtgccccaactacgaactacttgtgcctgtgctgctgaaggaaggagtgcgc
gcgctgccggaccactgccgccttacacctggtattcctctgaagcctatgcttgcgcac
cctactagaggcgtgaacgagatattcaccaggttcgagggcgtgcagttcacgtgcgaa
tggaagtacgacggcgagcgcgcgcaggtgcacgtgccgggcgcgccggactctggcccg
agcttccctgacgctcgcatcttcagccgtaaccaggaggacaacaccagtaaataccct
gacgtgctggcgcggctgtctacgctactgcagcccactgtacacagctgcgtgttggac
tgcgaggccgtggcgtacgacccagtcgccaagcagatactgcccttccaggtgctgtca
acgcgcaaacgcaaagatgcagaggcgtcgcagatcaaggtccaggtgtgcgtgttcgtg
ttcgacctgcttctgctgaacggtcgcgcgctggtccgtgagccgttagcggagcgccgc
gccctactccgtgaacacttcatagagaccccaggtgagtggcagttcgctgaatcccgc
gactgcagcacgatggaggaggtgcagcagttcatggaggaatcagtgcgcgggtcctgc
gaggggctaatggtgaagatgttgctcggcgagaacgccaagtacgacatcgcgcgacgc
tcgcacaactggctcaagctgaagaaggactacatggaaggtgtgggcgatagcgtagac
gcggtggtgctgggcgcgtaccgtgggcgtgggcggcgcggcggacgctacggtggcttc
ctgctggcctgctacgatcccgcttccgagcagtaccaaaccctgtgtaaactgggcacg
ggcttctctgaccaggacctggacacacttggcgagcagcttgacgcacaccgtatcgat
gctcccaggaactattatagttacgaggcgtcgttggcgccggacgtgtggtttgcggcg
gcgtgcgtgtgggaggtgcgctgtgccgatctgtctctttcgcccgcgcatcgcgcagcc
catggacttgtcgagcccgacaagggcatctcgctgcgcttcccacggttcgtgcgtgta
cgtgacgacaaggcaccggaacaggctacgtccagtgagcaggtagcacagctgtacctg
gcgcaggaccaggtgcgcaaccagaccaaggcgccgcgcgccgatcacgaggacttctac
tga
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