Battus philenor (pipe-vine swallowtail): 137925445
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Entry
137925445 CDS
T10485
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03013
Nucleocytoplasmic transport
bphi03015
mRNA surveillance pathway
bphi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137925445
09122 Translation
03013 Nucleocytoplasmic transport
137925445
03015 mRNA surveillance pathway
137925445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137925445
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137925445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
137925445
NCBI-ProteinID:
XP_068624985
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MTSVVRRREQDDSGEFSDASQDNDRSNSANDGGPNESDYDSAASESDHSERDPENQETER
RVDDDEDRSNPQYIPKRGTFYEHDDRTAASGEESTNTTSDVTSEKKEGAEAPAERRRPPR
KSETVNKWSHDKYNENEQMPKSRDELVAIYGYDIRNEDAPPHARRNRRYGRGPTKYTRTW
EDEEAYRRQAATQQLHRKPPNPEEFPELDAPGKKFNKKTRAPRPRSKSQPASNESSERGG
LRRNASIKTPKAKPTPKPNVAKQNAVNKSMTKTPAKEKMPPLENLTITTNVTNNSNDSQT
PPQRRVSAPVAQQRPVPTEQGKKKPTLNQHPQQNNATTNKPAQQQQQQPPQQQQQKPQQQ
QKPQQQKPQQTQGQQPQQASGAESKAGGVKRYSSLRQRPLAETYSPQQQQTQQQSQQQQQ
QQQKPQQQSQQQQQPQQQSQQQQQHRYHGDFPGNGSSQSQHQGSPVPQIHPQQLMHQVHR
NPPVNQPHGPSPPHQTLQQQQHSQQVRLGILDQPPQMVSHPHHTIHNIPPQHSIGQLPPA
QGYAPPAMMPAQYMQQSGSGPVFGGAAMYAQPPGSYPQHMYQHHNYATQAGGVTYYNCAE
QEPPQQPRAQRRPTAAIPIVRPAAPAAPDRPPNSTEKDNIDRIVENMFVRKPWPAHGADS
KEKSQDSRSSQEPQSKESSQPNSLTSSSTSDSKPVENSQKDVEDKEKVQESELTVPESIT
TDA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgtggttagaagacgggaacaggacgactcgggtgaattttcggacgcatcg
caggataatgaccggagtaattccgcaaatgacggtggcccgaacgagtcggattacgac
tcagctgccagcgagtctgatcattcggaacgggatcccgaaaaccaggagaccgagcga
agggttgatgatgacgaggaccggagcaacccccagtacatccccaagaggggaaccttc
tacgaacatgacgaccgcacggcagctagtggtgaagaatctacgaacacgacgtccgat
gtgacgtcagagaagaaggaaggtgcagaggcgccagctgagcgacgtcggccgccacgc
aagtcggaaaccgtcaacaaatggtcccacgacaaatataacgagaatgaacagatgcca
aaatcccgtgacgagttagtagcaatatacgggtatgatataagaaacgaagacgcccca
cctcacgctcgacgaaaccgacgatatggtcgaggaccgaccaagtatacccgtacttgg
gaagatgaagaggcataccggagacaggcagccactcagcagttacaccgcaaaccgccc
aaccctgaggagttccctgaactggacgcaccgggcaagaaattcaataaaaaaacccgt
gcaccgagaccaagatccaagtcccaaccggcttccaatgagtcgtcagagcgcggagga
ctccgaagaaatgcatctatcaagactcctaaagccaagccgactccaaagcccaacgtc
gccaagcagaacgctgtgaacaagagcatgaccaagactccggctaaagagaagatgcct
cctttggagaatcttaccataaccaccaatgttaccaataacagcaacgatagccagaca
cctccgcagagacgcgtgagtgcgccagtcgctcaacagagaccggtaccaactgagcag
ggcaagaagaaacccactctcaatcagcaccctcagcagaacaacgcgacgacaaataag
cccgcgcagcaacagcagcagcagccaccccagcaacaacaacagaaaccgcaacaacaa
cagaaaccgcaacagcagaaacctcagcaaacacaaggccagcaaccacaacaagcatct
ggagcggaatcaaaagcaggtggtgtcaaacggtatagtagtttgcgacagaggccgctc
gctgagacctattcgccgcagcagcaacaaacgcaacaacaatcccaacagcagcagcaa
caacaacaaaaaccacaacaacaatcgcaacaacagcaacaaccgcaacagcagtctcaa
cagcaacagcaacatagatatcatggagattttccaggaaacggttcttcccaatcacag
caccagggcagtcccgtgccacagatacaccctcagcaactcatgcatcaggtccaccgc
aatcctcctgtaaaccagccgcacggtccatcgccacctcaccagacccttcaacaacaa
cagcattcgcaacaggtccgacttggtattttggatcaaccaccacaaatggtatctcat
ccgcatcatactatacacaacatacctccacagcattctataggacaattaccaccggca
caaggatacgcaccgcccgccatgatgcccgctcaatatatgcagcaaagcggtagtgga
ccggtgttcggcggtgctgctatgtatgcgcagccacccggctcgtacccgcaacatatg
taccaacatcacaactatgcaacacaagcaggcggagtgacctactataattgtgcggaa
caagagcctcctcagcaaccgagggcgcaacgccgccccaccgctgccatccccattgtc
cggccagccgcgcccgccgcccccgacaggccaccgaattccacggagaaggacaatatt
gacagaattgtagaaaacatgttcgtgaggaaaccctggcccgcccatggcgccgattca
aaagagaagtcacaagatagcagaagttctcaagagccacaaagcaaagagtcatcacaa
cccaacagtctaacgtctagttctacgtcagattcaaagccagtggaaaattctcagaag
gatgtagaagataaggagaaagtgcaagaaagtgaattgactgtgccagaaagcataaca
acggacgcctga
DBGET
integrated database retrieval system
