KEGG   Battus philenor (pipe-vine swallowtail): 137926002
Entry
137926002         CDS       T10485                                 
Symbol
tex
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
bphi  Battus philenor (pipe-vine swallowtail)
Pathway
bphi03013  Nucleocytoplasmic transport
bphi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137926002 (tex)
  09122 Translation
   03013 Nucleocytoplasmic transport
    137926002 (tex)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bphi03019]
    137926002 (tex)
   03041 Spliceosome [BR:bphi03041]
    137926002 (tex)
Messenger RNA biogenesis [BR:bphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     137926002 (tex)
Spliceosome [BR:bphi03041]
 Complex C
  Other components
   EJC/TREX
    137926002 (tex)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137926002 (tex)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT122_1st eIF2A Beta-prop_EML Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_TEP1_C RMC1_N Beta-prop_HPS5 WD40_MABP1-WDR62_1st Tricorn_2nd WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N NBCH_WD40 PD40 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_ELP1_1st Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Cytochrom_D1 WD_LRWD1 Beta-prop_WDR11_1st CNH
Other DBs
NCBI-GeneID: 137926002
NCBI-ProteinID: XP_068625618
LinkDB
Position
Unknown
AA seq 328 aa
MKDHKQTQTPIEDLAELRSYFASHNVVREYIAHSSKVHSVGWSCDGRRLASGSFDKSVAI
FNLERSRLVQDFVFRGHTGSVDQLCWHASHADLLSTASGDKSVRIWDTRSHKCAASISTK
GENINIAWSPNGSTIAVGNKEDLVSFIDTRTYKVVTEEQFNFEVNEISWNNESDLFYLTN
GLGCVHILTYPGLQLQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWHVQELACLRV
FSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVQAATFTVAWHPSRYL
VAFACEDKEPPERKRDAGNLKLWGLPVS
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaaagatcacaagcaaacgcagactccgatagaggatttagcagagctacggagttac
ttcgcgtctcataatgtggtccgagagtatatagcccattcatcgaaggtccactccgtc
ggctggtcttgcgacggcaggcggcttgcgtccggctcctttgataagagtgtcgcgata
tttaacctggaaagaagtagactggtacaagactttgtgtttcgcggtcacacaggctcc
gtagatcagttatgttggcacgcctctcacgcagatctactcagtacagcaagcggtgac
aaatccgtgaggatttgggatacaagatcacataaatgcgctgcgagtatatcaacaaag
ggggagaatataaacatcgcgtggtcgcccaacggcagcactatagcagttggcaacaag
gaagatcttgtctctttcattgacacacgaacatataaagtggtaaccgaagagcagttc
aatttcgaagtgaacgaaatctcgtggaacaatgaatcggatctcttttatttgaccaat
ggcctcggctgtgttcatattctgacgtacccagggctgcagctgcagacggtgctgaag
gctcacccgggcacctgcatctgcatcgagcacgaccccaccggtcggtatttcgccacg
ggctccgctgacgccctggtctccctttggcacgtgcaggaactcgcctgtcttcgcgtc
ttttcaagattggaatggccggtccggaccttgtcattcagtttcgacggcaggctactg
gcctctgctagcgaagaccacatcatcgatatcggggacacggagactggtgagaaagtg
gcagagatcccggtgcaagcggccacgttcacggtggcctggcacccgtcgaggtatctg
gtggcgtttgcctgcgaggacaaggagccacctgaacgcaagcgcgacgccggcaacctc
aagctttggggtctgcccgtatcctga

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