Battus philenor (pipe-vine swallowtail): 137926474
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Entry
137926474 CDS
T10485
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bphi Battus philenor (pipe-vine swallowtail)
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bphi01009
]
137926474 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137926474 (HDAC6)
04131 Membrane trafficking [BR:
bphi04131
]
137926474 (HDAC6)
03036 Chromosome and associated proteins [BR:
bphi03036
]
137926474 (HDAC6)
Enzymes [BR:
bphi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
137926474 (HDAC6)
Protein phosphatases and associated proteins [BR:
bphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137926474 (HDAC6)
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
137926474 (HDAC6)
Membrane trafficking [BR:
bphi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
137926474 (HDAC6)
Chromosome and associated proteins [BR:
bphi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
137926474 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
137926474
NCBI-ProteinID:
XP_068626172
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MSSPPPVQQQRRSAGDHKKSTPPSTIITRNGARKAKIQTRAMSAGAKPSALVVNAKRKAL
QKKKQIVDSVIKDHYQIAMESKMKVKGQTGFVTEPRMVEHRCLWDDNYPECPERLISVLE
RCRELNLIEQCKQFEPRAAIKEELLTLHSPSVYETLESTHQNHNLDFLEDISSKYDAIYI
HPSTHELALIAAGSTIDMVERIVDGVVQNGAAFVRPPGHHAMRAEPCGYCFYNNVALAAK
HALDNRGLSRILIVDWDVHHGQATQQMFYNDNRVVYFSIHRYEHGAFWPNLRQSDYNYIG
DGQGKGYNFNVPLNKTGMDDADYLAIWHQLLMPMALEYQPELILISAGYDAAIGCPEGEM
EVTPACYGSLLHMLMSVCPSVCVVLEGGYCLPSLAEGAALTLRTLLGHPPPILPTIGEPS
DSIRDSILNCIYVQKPYWSCFNYQLMYSVGGVPNVCDREKQKHTVSHKWEGDETRPDKFA
TRDCYPKQDDETRRKIVDRLNHLRLVTELPSPQYNVCYVYDEAMLKHRNICEPGHVECPG
RIMRIHERHRDFGLLERVHHLPARAATDQDILAVHTEKHLNRLKELSITKLRDLNSQKEA
YDSVYFHPESLESAAVAMGCVLQAVDAVLSNLAGSGVCVVRPPGHHADEETPSGFCLLNN
AAAAARYAARAHGLSRVLLVDWDVHHGNGTQRITYNDNKILYISVHRYDNGTFFPQSRDA
DYNAVGEGPGEGFNVNIPWNKRGMGDAEYMAAFTQVVLPIAYEYNPELVIVSAGFDACVG
DPLGGCKVSPECYGRMTQMLRGLAGGKIILCLEGGYNITSISYAMTMCTKALLGDPIPFH
YNPKPEYHWSAVESINNVIKTHKKYWKSLKCQLALPVENVLEAPLPSRGLTMSDINNKIQ
NTPKLSTPVLMNESSNDSSKSFNQLQSSLEIDMTNLTIEKRKCSDGIHCGTDDENEDDNK
PISKHSLKPEDGSGSSQGGAGGTSKEADKQTLVDYLSANMQALVDGEMFAVVPVPWCPHL
DSLFAIPESVKFEQGVKCVECDEKNENWVCLHCYITACGRSINGHMQAHHRTTEHPLVLS
LLDLSVWCNVCDAYVDNPLLYDAKNNAHRCKFGEDMPWCYRTDIHME
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccccaccgcctgtacaacaacagcgtcgttccgccggagaccataagaaaagc
acaccaccttccactataataactagaaacggagcacgaaaagcaaaaatacaaacgcgt
gcaatgtcagccggagccaaaccatcagctttagttgtcaatgccaagcgtaaggcattg
caaaagaagaaacaaattgtggactctgtaattaaagaccattaccagattgctatggag
tcaaaaatgaaagtgaaaggtcaaactggctttgtgacggagccccgtatggttgagcat
agatgtctctgggatgacaattaccctgaatgtccagaaaggttgatcagtgttcttgag
agatgtagagagttgaacttgattgagcaatgcaaacaatttgagccacgggcagccatt
aaagaggaacttctaacacttcattcaccgtcagtgtatgaaacacttgaaagtacccac
cagaaccacaacctggacttcctggaagacatctcatctaaatatgatgctatatatatc
catccgagtacacatgagctggcgctgatcgcggctggttctaccatcgatatggtggag
cggatagtggatggtgtagtgcagaatggagcggccttcgtgcgcccgcccggacaccac
gccatgagagcggagccctgcggctattgcttttacaacaacgtagctcttgccgccaag
cacgccctggacaatcgaggcctaagccgaattttgatcgtggattgggatgtgcaccac
ggtcaggcaactcagcagatgttttacaatgataatagagttgtatacttttctatacat
cgatatgaacatggcgcgttctggccgaacctacgacagtctgattacaactacatcggt
gatggacaaggcaaggggtacaatttcaacgtacccctcaacaagacagggatggatgat
gcggattacctggctatatggcatcaactgcttatgcccatggctttggagtaccaaccg
gagctgattcttatatcggcgggctacgacgctgccattggatgtccagagggtgagatg
gaagtgactccagcctgctacggatctttgctacacatgctgatgagcgtgtgcccttct
gtgtgcgtggtgctagaaggtggttactgtctaccctcgctggccgagggcgcagctcta
acgctacgcacgctactggggcatccccctccaatactccctaccattggggaacccagc
gattcaatacgtgactcaatactgaactgcatctacgttcaaaagccttactggagttgc
ttcaactaccagcttatgtacagcgtaggtggcgtaccgaacgtgtgcgatagagagaaa
caaaagcacacagtatcgcacaagtgggaaggtgacgaaactaggcccgataagttcgcc
accagagactgctatcctaagcaagatgacgaaacgcgcaggaaaattgtggataggttg
aaccatttgagactagtcacggagctgccgtcgccgcagtacaacgtctgctacgtgtac
gacgaggccatgttgaaacacaggaacatatgtgaacccggccacgtggagtgtcctggt
cgtataatgcgcatccacgaacgccatcgagacttcggtctgctggaacgcgtgcaccac
cttcctgctcgcgctgccaccgaccaggatatcctcgccgttcatactgaaaagcatctt
aacaggctaaaagaactgtcaatcaccaaactccgagacttgaacagccagaaggaagcc
tacgactccgtgtactttcacccggagtcgttagagagcgcggcagtggccatgggttgt
gttttgcaggcagtggacgcagttttatctaacctagcgggttctggggtgtgtgtggtg
cggccgccagggcatcacgcggacgaagagacgcctagcgggttctgcctgttgaacaac
gcagcggcggctgcccggtacgcggcgcgcgctcacggactgtcgcgcgtgctgctcgtc
gactgggacgtgcatcacggcaacggcacgcagaggatcacgtacaacgacaataagata
ttatacatttcggtgcatcgatacgacaacgggacgttcttcccacagtctcgtgatgcc
gactacaacgccgtaggggaaggccctggagaaggattcaacgtcaacattccctggaat
aagcgcggcatgggtgacgcggagtacatggcagcgttcacacaagtcgtgctacccatc
gcttatgagtacaacccggagctggtcatcgtgtcggctggcttcgacgcctgtgttggt
gacccattgggtggttgcaaagtgtcacctgaatgctacggaaggatgactcaaatgctg
cgaggattagctggcggaaagataattctttgtttagaaggcggttacaatataaccagc
atatcctatgcaatgaccatgtgtacgaaggctttacttggggatccaataccgttccac
tataacccgaaacccgaataccactggtcagctgtagaatctattaataatgttattaaa
actcacaaaaagtactggaagagcttgaaatgccaattagcattacccgtagagaatgtt
ctagaagctccattgccatctagaggtttaactatgagtgatattaacaataaaatacaa
aatactccaaaactgtcaacgccagtgttaatgaatgagtcatcgaatgacagttcaaaa
tcattcaatcaacttcaatcgtcattagaaatcgatatgaccaatttgaccatagagaaa
aggaaatgctccgatggtatccattgcggtacagatgacgaaaacgaagatgataataaa
cctattagtaaacattccttaaaacctgaagacggttctggaagttcacagggtggggct
ggaggtactagcaaagaggctgacaaacaaacactagttgattatctgtcagcaaacatg
caggcgctcgtcgacggcgagatgtttgccgttgttccggttccttggtgcccgcatctg
gacagcctgttcgcaattccggagtcggtgaaatttgaacaaggtgtcaaatgcgtggaa
tgtgatgagaaaaatgaaaattgggtgtgtctacattgttatatcactgcttgtggtcgg
agcatcaacggccatatgcaggcccaccatcgcacaacagaacacccactggtgttatct
ctactagacctctcggtctggtgtaacgtatgcgacgcatatgtcgacaacccgctattg
tacgatgcgaagaataacgcacacaggtgcaagttcggcgaggacatgccctggtgctac
aggaccgacatacacatggaataa
DBGET
integrated database retrieval system
