Battus philenor (pipe-vine swallowtail): 137926761
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Entry
137926761 CDS
T10485
Name
(RefSeq) collagen alpha-1(II) chain-like
KO
K19719
collagen type II alpha
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137926761
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bphi00536
]
137926761
Glycosaminoglycan binding proteins [BR:
bphi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137926761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
PSP94
Motif
Other DBs
NCBI-GeneID:
137926761
NCBI-ProteinID:
XP_068626562
LinkDB
All DBs
Position
Unknown
AA seq
1489 aa
AA seq
DB search
MTWQVRTACLALLVLPVACKDLAEASRDEMIELPQAQDPDLVNYDDYNPFGEDENAIIAE
RDFVGSQSTTSKYSSPATQRCADLGRTYLEGETWKRDNCTLCQCHLGRVNCSVLPACLLP
TATSRPTYTAAPQPSTPVRGVQGPPGDDGPSGPPGAPGVSGVPGAPGSPGPAGPMPDVNA
YLAQLAATAGGDKGPAFDPYQYMQAPVGAPGIRGIPGPQGPPGPQGFQGPRGEPGEPGLP
GPQGPPGERGPQGLPGKDGSPGEDGEPGPAGAVGQPGSRGSPGVPGIQGLKGHRGFDGKD
GAKGEQGFPGEKGPTGLPGQMGPPGPLGPVGPRGERGREGPPGPPGMRGVDGTPGPPGLM
GNVGKPGSPGFPGAPGIKGEQGIVGPKGSQGIQGPRGEAGRPGQPGEVGAPGLAGRDGTP
GEKGVQGQTGASGPQGFPGPRGTPGIAGDPGIPGTKGMPGQPGDRGAKGDAGIRGETGAP
GPRGLPGSVGPEGKRGKRGLRGPAGNIGPQGDRGLTGMRGLPGADGPLGPKGQPGERGAL
GLPGSKGSTGDTGRPGPQGLQGPRGLVGRPGMTGKSGPPGERGIPGADGRPGEQGAQGLQ
GPPGLMGSPGERGLQGEPGKDGEPGQQGQQGPKGDAGRDGSQGIQGPQGAIGPAGERGPQ
GPPGPTGFPGMPGAAGLPGSPGKEGEPGVAGQTGPPGPSGPRGERGFTGERGSPGQPGVA
GEKGEVGSQGSDGPPGPEGPKGSKGHPGQLGAMGLPGPRGMSGLPGEKGERGAAGPTGHE
GPPGRQGEQGPQGPVGPQGHPGEPAERGEPGTPGMPGEPGAPGSQGERGQPGLQGSPGLP
GAPGLTGMPGLKGDRGYMGAKGQQGSPGNPGIPGEAGQRGLAGQPGAKGARGEQGIKGDI
GHAGLPGRPGELGPQGPQGSPGQAGAPGMPGAKGTAGEPGRPGPVGPIGLTGAQGPEGPM
GERGSEGETGPQGPIGAPGSAGERGPIGLPGIVGPPGPQGLRGSQGESGSPGKPGIDGSP
GPMGPVGAQGPPGPMGEPGPEGRPGKLGQPGLPGRPGDKGPTGQPGASGPAGPPGMQGPS
GPSGPPGQTGERGLRGEPGPSGVDGPQGPSGKPGPPGLDGAKGERGEAGADGTKGHAGLP
GLPGMVGAPGRPGERGLPGPQGIPGKDGDIGPRGSPGRDGSPGPQGPVGPPGGRGPPGDS
GRHGPPGPAGPPGPPGLPGEGLAYDAAAIAAMLQQGSVKGPDPLGDDPNSMPPRFFKDDM
SPSERKKIVMKAYEQLKVSLNKFLKPDGSKEAPAKTCGDIKYHHPDSQSGQYWIDPNGGD
MNDAILVHCDMSTGASCVFPKPMQSQDIAYKGKEREAWLSEIEDGFTISYKAEHSQLTYL
QLMSSRAVQNVTLHCLNTVGYFDPATKNYRHGLKLLAFNDAEILPKANNRLRYKALLDDC
QYKKQEWARTIVQYETDKPGRLPLLDVAVRDVGRRDQMFRLELGLACFS
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggcaagtaagaactgcctgcttggcactcctggtgctgccagtggcttgcaag
gacctggcagaggcatcacgcgatgagatgattgagcttccgcaagctcaagatcccgac
ctcgtcaactacgatgactacaatccattcggggaagacgaaaacgctattatagcggaa
cgtgatttcgtaggatctcaatcgacgaccagtaagtattcttcgccagctacgcaacgc
tgcgcggatctaggacggacgtacctggagggtgagacgtggaagcgagacaactgcact
ctctgccagtgccacttgggacgtgtgaactgctctgtcctccctgcctgtctactacca
acagcaactagcaggccgacgtataccgctgcacctcaaccttctactcccgtaagaggg
gtgcaggggccgcctggtgatgacggtccatctggtccacccggagcaccaggagtcagc
ggagtacctggtgctccaggatcaccaggacccgccggacctatgccagatgttaatgcg
taccttgcacaactagcagcgacggccggcggcgacaaaggtcctgcctttgatccttat
cagtatatgcaggcacccgttggcgcgccaggaataagaggaattccaggaccacagggt
cccccgggcccacaaggattccaaggacctcgtggtgaacccggtgaacctggtttgcca
ggacctcaaggacctcctggtgaaagagggccacaggggcttccaggaaaagatggatct
ccaggagaagacggagaaccaggtcccgctggtgccgttggacagccaggatcaagaggc
tcaccaggtgttccaggcatacagggcttaaaagggcatcgcggattcgatggcaaagac
ggcgctaagggcgaacagggtttcccaggagagaaaggtcctaccggattacctggacaa
atgggaccgcccggtcctttgggtcccgtgggtcctcgaggcgaacgtggacgagagggt
cctccaggtccaccaggcatgcgaggtgtagatggaactcctggaccaccagggttaatg
ggtaatgtaggtaaacctggatcgccaggctttcctggagcccctggaataaaaggcgaa
cagggtatagtaggacctaagggaagtcaaggtattcaaggaccaagaggcgaagcaggt
cgccctgggcagccaggtgaagttggagcacctggactggcaggaagagatggcactcct
ggagaaaagggagtacaaggtcaaactggagcatctggacctcaaggttttcctggacct
agaggaacgcccggtatcgctggcgatccgggtatccctggaaccaaaggaatgccgggg
caacctggagatcgaggagcaaaaggtgacgccggtattagaggagaaactggcgctcct
ggaccacgtggcttaccaggtagtgtaggaccagaaggaaagcgtgggaaacgcgggtta
cgtggaccagccggcaacattggcccgcaaggagaccgagggttaaccggaatgagaggc
cttcctggagcagacgggcctttgggtccaaaaggtcagccaggcgaaagaggagcatta
ggtttacccggatcaaaaggtagcactggtgatactggtagaccaggaccccaaggttta
caagggccgaggggacttgttggcagacctggtatgaccggaaaatctggtcctcctggc
gagagaggaattcctggtgctgatggacgacccggggaacaaggtgctcaggggctacaa
gggcctcctgggttgatgggaagtcccggtgaaagagggctacaaggtgaaccagggaaa
gatggtgaaccaggtcaacaagggcaacaaggacctaaaggcgatgcaggacgagatggt
agtcaaggaattcaaggaccgcagggtgctattggaccagcaggagaaagagggccacaa
ggtcctcctggacccactggtttcccgggaatgcctggcgctgcgggattaccaggatct
cctggaaaagaaggagaacctggcgttgctgggcaaactgggcctccgggaccttcagga
cctcgtggtgaaagaggatttactggtgaaagaggaagtcccggtcaacctggagtagca
ggagaaaaaggggaagttggttcacaaggctccgatggtccaccgggaccagaaggtccg
aaaggcagtaaaggtcaccctggacaacttggcgctatgggactcccgggcccacgtggt
atgtccggcctccctggagagaagggcgaaagaggtgcagctgggccaactggacacgaa
ggacctccaggaagacaaggagagcaaggtcctcaaggtccggtgggtcctcaaggccac
ccgggagaaccagcggaaaggggagaaccgggcactccgggtatgcctggcgaaccgggg
gcacctgggtcgcaaggcgaaaggggacaacctggattacaaggctcacccggtctcccg
ggcgcacccggcttgacgggtatgcctgggttgaagggggacagaggttacatgggagca
aaaggtcaacaaggatcccctggaaatccaggaattcctggagaagctggacaaagaggt
ctcgctggacaaccaggagcaaaaggagcaagaggagaacaaggaattaaaggtgacatt
ggtcatgcaggcttgccaggaaggccaggggaattaggtcctcagggtccacaaggaagt
cctggacaagctggagcacccggaatgcccggagctaaaggcactgccggagaaccaggt
aggccgggtccagtaggacctatagggctgaccggcgctcaaggacctgaagggcctatg
ggtgaaagaggaagtgaaggcgaaacgggaccacaggggccaataggagctcccggttca
gctggtgagaggggaccgattggacttcccggaattgtaggcccacctgggccacaagga
cttcgaggctctcagggcgaaagtgggtctcctggaaaacctggtatagacggaagtcca
ggaccaatgggacctgtcggtgcccagggaccgcccggaccgatgggagaacctggaccg
gagggtagaccggggaaacttgggcagccaggattgcctggtagaccgggcgacaaagga
cctacaggccaaccaggcgcgtcaggtcccgctggacccccagggatgcagggtccatcg
gggccatcagggccacctgggcagactggtgagcgaggtcttagaggtgaacctggacca
tcgggtgttgatggccctcaaggtccttctggtaaaccgggaccgccaggattggacgga
gctaaaggtgaacgcggcgaggctggtgctgatggtactaagggccatgcaggtctaccc
ggattacctggtatggtaggagcacctggaaggccgggagaaaggggattgccagggcca
caggggattcctggaaaagatggcgatataggaccgagaggaagcccaggccgtgatggt
agtccgggtccacaagggccagtagggcctccgggaggtcgaggtccgccaggcgattca
ggcagacacggcccaccgggacccgccggtcctccaggaccccctggtttgcccggcgag
ggactagcttatgatgctgctgccattgccgccatgcttcagcaaggttcagtcaaaggg
cccgatccattaggcgatgatcccaatagcatgccgccaagattcttcaaagatgatatg
tcgccctctgaacgcaagaaaatagtaatgaaagcttatgaacagcttaaagtatctctg
aacaaattcttaaaacctgatggaagcaaagaggcaccggcgaagacgtgcggtgacatt
aagtaccaccatccggattcacaaagtggacaatattggatcgatccgaacggcggtgat
atgaatgacgctatattggttcactgcgacatgtctacgggtgccagctgtgtatttcct
aaaccgatgcagtcgcaagacatcgcatataagggcaaggaacgcgaggcatggttaagc
gagatagaagatggtttcacgatttcttacaaagcggagcacagtcaactgacgtatttg
caattgatgtcttcgagagctgttcaaaacgtaaccctgcactgtctgaacaccgtcgga
tacttcgatcccgcaacgaaaaattacagacatggactgaagttactcgccttcaacgat
gcagagatcttacccaaagcaaataaccgacttagatacaaggctttattggatgattgt
cagtataagaagcaagaatgggcaagaactatagtgcagtacgaaactgataaaccaggc
cgtctgccgttactggacgtagccgtgcgagacgtcggaagacgggaccagatgttccga
ctagagcttggattggcatgtttcagctaa
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integrated database retrieval system
