Battus philenor (pipe-vine swallowtail): 137927003
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Entry
137927003 CDS
T10485
Symbol
Polr2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03020
RNA polymerase
bphi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137927003 (Polr2A)
09124 Replication and repair
03420 Nucleotide excision repair
137927003 (Polr2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bphi03021
]
137927003 (Polr2A)
03400 DNA repair and recombination proteins [BR:
bphi03400
]
137927003 (Polr2A)
Enzymes [BR:
bphi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137927003 (Polr2A)
Transcription machinery [BR:
bphi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
137927003 (Polr2A)
DNA repair and recombination proteins [BR:
bphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
137927003 (Polr2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
137927003
NCBI-ProteinID:
XP_068626873
LinkDB
All DBs
Position
Unknown
AA seq
1903 aa
AA seq
DB search
MATTNDSKAPLRQVKRVQFGILSPDEIRRMSVTEGGIRFPETMEGGRPKLGGLMDPRQGV
IDRSSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKLLVSPTNP
KIKEVVMKSKGQPRKRLTYVYDLCKGKNICEGGEDMDIGKEGEEGKRGSGHGGCGHYQPS
IRRQGLDLTAEWKHANEDTQEKKIIITAERVWEILKHITDEESFILGMDPKFARPDWMIV
TVLPVPPLSVRPAVVMFGAAKNQDDLTHKLADIIKANNELMRNEQLGAAAHVLAENIRLL
QFHVATFVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNAQYPGAKYIVRDNGERIDLR
FHPKPSDLHLQYGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFLTKEQVMNLLMFLPTWDGKIPQPCILKPQPLWTGKQIFTLIIPGNVNMIRTHSTHP
DEEDDGPYKWISPGDTKVVVEHGELLMGILCKKSLGASAGSLLHICMLELGHETAGRFYG
NIQTVINNWLLLEGHSIGIGDTIADPQTYQEIQRAIVKAKDDVIEVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVAGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLAGETVEFQNLPTVK
LSNKAFEKKFKFDPSNERYLKRIFNEDIIKELTESGYVISDLESEWEQLSKDREILRQIF
PSGESKVVLPCNFKRMIWNVQKIFHINKRMPTDLSPIKVIQGVKDLLKKCVIVAGEDRLS
KQANENATLLFQCLVRSTLCTKFVSEEYRLSSEAFEWLIGEIETRFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNNEESKFQ
DNDEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIAKVYMHLPQTEAKKRIIITEQGEFK
AIAEWLLETDGTSLMKVLSERDVDPIRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQFY
GLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAEVD
PMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKHGMEMGGLGVGMGVGGGMYFGVGTPSMT
PLMTPWSTQNTPGYGSSVWSPGQVGSSMTPGGPSFSPSGASDASGLSPAYSAWSSQPGSP
GSPGPPLSPYASPAGASPSYSPTSPIYTGASPIQSNPTSPHYSPTSPSYSPTSPNYSPTS
PIYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPAYSPTSPGYSPSSPSYSPTSPVYSPTSPSYSPSSPNYTPTSP
AYSPSSPSYSPTSPAYSPSSPRYSPSSPKYSPTSQNYSPTSPSLSGGSPTYSPTSPQYSP
TSHHYSPTSPAYSPSSPQHPASTPYSPSSPNYSPSSPNYSPSSPGYSPSSTKYSPTSTTY
TPTSPNYSPTSRVYSPSSGGPTTYSPTSPTYSANSPPYDEGDD
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacgaacgattcgaaggcgcccttgcgccaagttaaaagagtacaatttggt
atattgtctcccgatgaaatccgacgtatgtccgtcacagaagggggcattcgcttccca
gaaactatggaaggcggcagacccaaacttgggggtcttatggatccccgacaaggggta
attgatagaagttcacgatgccaaacctgcgcaggaaatatgacagaatgccctggacac
tttggccatattgatttggctaaaccagtttttcacattggtttcattacaaagacaata
aaaatattgagatgtgtttgcttttactgctctaaactacttgttagcccgacgaaccca
aaaattaaagaagttgtcatgaaatctaaaggacagccacgtaaaagattgacatatgtt
tatgacctttgtaaaggtaaaaatatttgtgagggtggtgaagatatggatattggaaaa
gagggagaggaaggtaaaagaggctcaggacatggtggttgtggacattatcagccatct
atcaggcgtcagggtttggatctaactgctgaatggaaacatgcaaatgaagacacacaa
gaaaagaaaataattattacagctgagagagtgtgggaaattcttaaacacatcacagat
gaggaatcatttattttgggtatggatccaaagtttgctagacctgattggatgatagtg
acagttctgccagtaccaccattatcagtgagaccagctgttgttatgtttggtgctgca
aaaaatcaagatgacttaactcacaaacttgctgacataattaaagcaaataatgaatta
atgaggaatgaacaattaggtgcagcagcacatgttcttgctgaaaatataagactgtta
caattccatgtggccacatttgtagataatgatatgcctggaatgcccaaagcaatgcaa
aagtctggaaaacccttgaaagctatcaaggctcgtttgaaaggaaaagaaggaagaatc
agaggaaaccttatgggaaaacgtgtggatttttctgcccgtactgttattactccagac
cctaatttgcgtattgatcaagtaggtgtgcctcggtccattgcacaaaatttaacgttt
cctgagttagtcacgccttttaatattgatagaatgcaagagcttgttagaagaggaaat
gctcagtatcctggtgctaaatacattgtacgtgataatggagaaagaatagatctacga
ttccatcctaaaccatctgatctgcatttgcaatatggatataaagtagaacgacattta
agagatgatgatttggttatcttcaatcggcagcctacacttcacaagatgagtatgatg
ggtcatagagtgaaagtgctgccttggtcaacattccgtatgaacttgagttgtacttcc
ccatacaatgctgattttgatggagatgaaatgaatttacatgtcccacaatctatggaa
acgcgtgccgaagtagaaaacattcacattacgccaagacaaattattaccccacaggcc
aataaacctgttatgggtattgtacaagatacactaacagctgtgagaaagatgacaaag
cgagatgtgttcttaacaaaagaacaagttatgaatcttcttatgtttttacctacatgg
gatggcaagatcccacaaccatgtatccttaaaccacaaccattgtggaccggcaaacaa
atattcacattgataattcctggaaatgttaacatgatcagaacacattccacccatcca
gatgaagaagatgatgggccatataaatggatttcacctggtgacactaaagttgttgtg
gaacatggggaattgctcatgggtatactttgtaaaaaatctttaggtgcatcagcaggt
tctttgcttcacatttgcatgttggagttaggtcatgaaactgctggaagattctatggt
aatattcagactgttatcaataattggctgctgttagaaggacattctattggtattggc
gatactattgccgatcctcaaacataccaagaaattcagagagctatagtaaaagccaaa
gatgatgtaatagaagttatacaaaaagcccacaacatggagttagagcctactcctggt
aataccctcagacaaacctttgaaaatcaagtgaatcgtattcttaatgacgcgcgtgac
aaaaccggaggctctgctaaaaaatctttaacagaatataataatcttaaggctatggtg
gtcgctggctcaaaaggatcaaatattaacatttctcaggttattgcttgtgtgggacaa
caaaacgttgaaggaaaacgtattccatttggtttccgcaagagaactcttccacatttc
attaaagacgattatggtcctgaatcaagaggtttcgtagaaaattcctatcttgccggt
ttaacgccatcagagttttatttccatgctatgggtggtcgtgaaggtcttatcgatact
gccgtcaaaacagctgagactgggtacattcagcgtcgtctgataaaagctatggaatct
gtaatggtgcattatgatggtacagttcgtaactctgttggacaacttattcagttgcga
tatggagaagatggtttggctggagaaactgtagagtttcaaaatttaccgacggtcaaa
ctctcaaataaagcatttgaaaagaaattcaaatttgatccatcaaatgagagatacctt
aaacgaattttcaatgaagatattattaaagagttaacggaatcgggctatgtcatatca
gatctagaaagcgaatgggagcaattgtcaaaagacagagaaatattacgtcaaattttc
ccaagtggtgaatcaaaggtggtgttgccttgcaatttcaaaagaatgatttggaatgta
caaaagattttccacattaacaaaagaatgccaacagacctaagtcctatcaaagtaatt
cagggtgtaaaagacttactcaagaaatgtgtaatagtagctggagaagatcgtttatct
aaacaagccaatgaaaacgcgactcttttattccagtgtttagtaaggtctacactctgt
acaaaatttgtatctgaagaatatcggttatctagtgaggcatttgaatggttaatagga
gaaattgaaactcgttttcaacaagcgcaagttaatcctggtgaaatggttggagcttta
gctgcacagtctcttggtgaacctgcaacacagatgacattgaatactttccactttgct
ggtgtgtcatccaaaaatgtaacacttggtgtgccccgtttgaaggaaattatcaatatt
tcaaagaagccaaaagctccatcccttaccgtatttttgacgggcggtgccgccagagat
gctgaaaaagctaaaaacgtcctttgtcgactagaacatacgactttgcggaaagttaca
gccaatacagccatttactatgacccagatccacaaaacacagttattgcagaagatcaa
gaatttgtgaatgtctattatgaaatgcctgactttgatcccaccaagatatcgccctgg
ctattacgtattgaattagatcgtaaaaggatgactgataaaaaattaactatggaacaa
attgcagaaaaaattaatgcaggctttggagatgatttgaactgtattttcaatgacgac
aatgctgagaagttggttttgcgaataagaatcatgaataacgaagaaagtaaattccaa
gataatgatgaagaaactgtagataaaatggaagatgatatgttcctgcgttgtattgaa
gcaaatatgttatcagacatgactttgcaaggtatagaagctatagctaaagtgtacatg
catttaccacagactgaagctaaaaagcgtattattatcacggaacaaggagagttcaaa
gcaattgctgaatggttgttggaaactgatggtacatctttgatgaaagtgctctcagaa
agagatgttgatccgatacgtacattcagtaacgatatctgtgaaatattccaagtactt
ggtattgaggcagttcgaaaatctgtagaaaaggaaatgaatgctgtgttgcagttctat
ggattatacgtaaactatcgccatctcgctttgctttgtgacgttatgactgcgaaaggc
catcttatggctataacacgtcatggtatcaacagacaagatactggggctctcatgaga
tgctcttttgaagaaactgtcgatgtcttactagatgctgctagtcatgctgaagtagat
ccaatgaggggagtatcggaaaatataataatgggtcaattaccgaggatgggaactgga
tgtttcgacttgcttcttgatgcagaaaaatgtaaacatggtatggaaatgggaggtctt
ggagttggcatgggtgttggcggaggaatgtatttcggtgtgggaacaccatcaatgaca
ccattaatgacaccatggtctacccagaatacaccaggctatggtagcagtgtttggtca
ccaggccaagttggtagcagtatgaccccaggaggtccatcattttcgccatctggtgca
tctgacgcatcaggactttcaccagcatacagtgcgtggtcatcacaaccaggttctcca
ggatcgcccggacccccgttatcaccttacgcttctccagccggagcatccccatcctac
tctccaaccagtcccatttacacaggtgcttctcctattcaatcaaaccccacatctcca
cattactcaccaaccagtccctcatattctccaacttcgcctaattactcaccgacatcg
ccgatatattcaccgacttccccaagttattcgccgacgtcgccaggctattcgccgaca
tcaccgtcatattcaccgacatcgccgagttactctcctacatcgcctagttactctccg
actagtccagcatattcaccaacttctcccagttactcgcccacttcacccagttattca
ccaacaagtccgtcgtattcgcctactagcccctcttattcaccgacaagtccggcttat
tcgccaacttcaccaggatattcgccatcttctcctagttactcgcctacaagtccagtt
tacagtccgacttcaccaagttactctccgtcgtcaccaaattatacaccaacatcacct
gcctattccccgtcaagcccttcatattctcctacttctccagcgtattcgccatcttcg
ccgagatattcaccatcctcgccgaaatattcaccgacgtcacaaaattattcgccaaca
tcaccatctctttctggtggcagtccgacatattccccgacgagtccgcaatattctcct
acaagtcaccattattcacctactagccccgcatattccccttcgtcgccgcaacatcct
gcgagtacaccgtattcaccgtcatcgccgaattattcaccgtcttcacctaattattcg
ccatcatctccgggttattctccttcctcaaccaaatactctcctacatctacgacctac
actccgacgtctccgaattactcgccaacttctcgcgtgtattcaccttcttctggtggg
ccaacgacctattctccaacgtcgcctacatattctgctaattccccaccatacgacgag
ggcgatgattaa
DBGET
integrated database retrieval system
