KEGG   Battus philenor (pipe-vine swallowtail): 137927396
Entry
137927396         CDS       T10485                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
bphi  Battus philenor (pipe-vine swallowtail)
Pathway
bphi03018  RNA degradation
bphi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137927396
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137927396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bphi03019]
    137927396
   03041 Spliceosome [BR:bphi03041]
    137927396
Messenger RNA biogenesis [BR:bphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137927396
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     137927396
Spliceosome [BR:bphi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    137927396
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 137927396
NCBI-ProteinID: XP_068627295
LinkDB
Position
Unknown
AA seq 139 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEETQVKARGRSEVSKGRGGSQNARAGRGGGRGAFGNRGRP
APLARGGAPARNPQNKNKK
NT seq 420 nt   +upstreamnt  +downstreamnt
atgttgccgctctcattgctgcggacagcgcagaaccatcccatgttagtggaattgaaa
aacggtgaaacttataacggtcatctagttagttgcgataattggatgaatattaacctc
cgagaggtgatttgtacgtcgcgcgatggtgataagttctggcgcatgccggagtgttat
atccgcgggagtactatcaagtatctgcggatcccagatgaagttatcgacatggtaaaa
gaggagacgcaagtgaaggcgaggggacgaagcgaagtgtctaagggtagaggcggttca
caaaacgctcgcgcaggtcgcggtggcggacgtggagccttcggaaaccgcggccgtccc
gccccactcgcacgaggcggagcgcccgctcgaaaccctcagaacaagaataagaaataa

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