Battus philenor (pipe-vine swallowtail): 137928837
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Entry
137928837 CDS
T10485
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137928837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137928837
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137928837
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
CdAMP_rec
DUF3124
Motif
Other DBs
NCBI-GeneID:
137928837
NCBI-ProteinID:
XP_068627927
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MAEIYKLIHPVKYFNDYISRNIRPDGRKFSELRNIKLNINSIKTAETSGVVKCGNTTVIC
GVKLELATPRAEEPDSGFLVTNVELLPLCSSKIKPGPPSDYAQVISNIVSDIVKNSQCVN
LKDLCIVYDKLAWVVYCDIVCIDHDGSLVDACIIALMSSLKTLTLPSVTFDPETEEIHVD
TNNRSALKVDGLPVATSFAIYPSFERSALLTDPSAYEEDMCGGNGANFIVCWNKGFLCGT
QKFGGSTLSIEDEKEALQIAKQRTKLIEKLINTCIENEIK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatttacaaactaatacacccagttaaatatttcaatgattacatttctcga
aatattaggcccgatggtagaaaattctctgaacttcgtaacataaagctaaatatcaac
tcaataaaaactgcagaaactagcggagtagttaaatgcggaaatacaaccgttatttgt
ggcgtaaaattggaattagcaactccaagggctgaagaaccagactctgggtttttagtc
acaaatgttgagttgctgcctttatgctcttcaaagattaaacctggtccaccatcagat
tacgcacaagttataagcaacattgtatcagatatagttaaaaattcccagtgtgtcaat
ctaaaagatctctgcatagtttatgataaactagcctgggtagtttattgtgacatagtt
tgtatagatcatgatgggagccttgttgatgcctgtattattgcattaatgtcaagtctc
aaaacattaacattgccgtctgtgacatttgatccagaaacagaagaaattcatgtggat
actaacaatagatcagcactgaaagtcgatggtttaccagttgcaacaagttttgccata
tatccatcatttgagcggagtgcattgttaactgatccttcagcctatgaagaggatatg
tgtggtggaaatggagctaactttatagtgtgttggaacaagggatttctttgtgggaca
caaaagtttggaggaagcactctgtcaattgaagatgaaaaggaggctttacaaattgca
aaacaaagaacaaagctaatagaaaaacttatcaatacatgcatagaaaatgaaataaaa
tga
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