Battus philenor (pipe-vine swallowtail): 137929368
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Entry
137929368 CDS
T10485
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137929368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137929368
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137929368
mRNA cycle factors
Common to processing body (P body) and stress granule
137929368
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
137929368
NCBI-ProteinID:
XP_068628377
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MVLNAAVQMLREADELKSKILKFNSGTSMLQDRSLWTTQQQLQNVYQKILMLDLDYALDK
KVEQDLWNVGFKQQIEALQSISKDRKNPLRSEGQAMLSWVLQAAAGFYLCLLHQICTSFK
LDLPFRRRASLLGSVEAWGPGATAAPAAARYASQHCLVHLGDLARYRQQLRVAHTFYRHA
LAVSPHSGQPYNQLALVAWRRGRRLAALYWHVRSLLVRAPFPPAPTNLARTLAAASREVK
EAPPMPVLPGLTNPVSSTAVAKTERLDAHSYITELIRAANYIHTVEQLDTASTLVNTLNT
SLTPLVATNSFEPMTLIKMSCVLIWLVQSSSEECAENALSADEATAARLAAALAASTVLS
LLLPSYTASEPPKKALPALKVWLHWMSSRPQALETAAWRARPQLWPALAHVLAALTPRAA
HLTADLYDTVPLPEDEELHGFLPLEEAFKGLKFSYHTTWDTYGGRLPELEAGQDGDTGGS
PSSVAASCFSSEPGLEDRVRAHRLVQLGKRLAEQHPDLFTCTTEEDGGLTFAACSGGGEQ
LTRALAELSMVEREAEESRASDTLDDSEDEPAPPPPPVIISEADFREKVREKRVGILKPQ
GSLERAREERALATTQDDQGVEEDGKGEDKKEARKPRVNIAMAAIMRKQEETNKQVKFAS
PPPTPDSVTDASESSAKEADKPKVLQPKAIKSLTNLPIGRKTGGILSLKDKSAGYPHLVN
TDPEPPKKADKDERKDTKPVAAVNQTAQQNFQPKWQEHTPQTWPMPPQQFNEPRMGFQKN
YGIQNTGISYNPNYQAAPGFGQGIRLPVVNPKEIDVRTAALQKQTSRPELFQEGHKFTNH
GYQMSGDKKNFLNDLPPRFANQYRYWQNAQDNQPGENKFRDDSFKSNAFEQQPLRNWSNQ
QPDYQQPMTWWKPENTPLFNTNFSTPINIQPNYFSPHISSNTPNPYLNHSYNQNQGQKLD
SVGPNWQPTIGQPQIPTLQNLVTSPSFSASLNNFGSYAPSVGYDTSMYPQFSSKLGFQPM
QVKTEKPYQGKEMDEAVNFAASVMDMQQRNMNFNAVNQDAGVASPLDQIGGCEGTSAGAG
NTYSLFSAATEPAAWTQRQPHQSLWSGPGPSPLERLLEQQKQMKQPPTPQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggttttaaatgccgctgtacagatgttaagagaggcagatgaattgaaatcgaagatt
ttaaaatttaatagtggtacctcaatgcttcaagatcgcagcctgtggaccacacaacag
caattgcaaaatgtttatcaaaagatattaatgctagaccttgattacgcactagacaag
aaagttgagcaagatctttggaatgttggctttaaacagcagattgaagcattgcaatct
atctccaaagacagaaaaaatcctcttcgcagtgaaggtcaggctatgttatcatgggtc
ctgcaggctgcagctggcttctacctgtgtcttcttcatcagatttgcacttctttcaag
ctagatttaccatttaggcgtcgtgcgtcattgctgggctctgtggaggcgtggggtcct
ggggcgacggcagcgccggctgctgcgcggtatgctagtcaacactgcctggtccacttg
ggagacctggcacgatatcgacaacagcttcgtgtcgctcacaccttctaccgtcatgcg
ctggcagtttcaccgcactctggacagccgtacaaccagctagcgttggtggcctggcgc
cgcggtcgccgcttggctgcactctactggcacgtccggtcgttgctagttcgcgcgccc
tttccccctgcaccaactaatttggcaagaactcttgctgcggccagccgtgaagtgaaa
gaggctccacccatgcctgtgttacctggactcactaacccagtttcaagtacagctgtt
gcgaagactgagcgattggatgcacattcttatatcaccgagcttatcagagccgccaac
tatatccacacagttgaacaattggacacggcgagtaccttagtcaacacgctaaacaca
tcgttgacaccactcgttgctaccaacagctttgaacctatgacgcttattaagatgtcg
tgtgtgctgatctggctggtgcagtcttcgagtgaggagtgtgctgaaaatgccctgagt
gctgatgaggcgacggctgcgcggctggcggcagcactggctgcaagcaccgtgttgtcg
ttactcctgccttcatacaccgcgtcagaaccgcccaagaaggccttaccagctctgaaa
gtgtggttgcactggatgtcgtctcgaccccaggcgctggagacggctgcgtggcgtgca
cgcccccaattgtggcctgcgctcgcgcatgtactcgctgcactcaccccgcgcgccgca
cacctcaccgcagacctctatgacacagtacctttacctgaggatgaggagctccacggc
ttcctgccgctggaagaagcgttcaagggtctgaagttctcatatcataccacgtgggat
acatatggtggcaggttgccggaactggaagcaggacaggatggagatacaggtgggagt
ccttcgagcgtggcggcttcgtgcttcagcagcgagccagggttggaagaccgagtgcga
gctcaccggctcgtccagctcggcaagcggctcgccgaacagcaccctgacctgttcaca
tgcaccaccgaagaagatggcgggctgacattcgcggcgtgttcgggaggcggtgaacag
ctgacgcgtgcgctcgctgagttgtctatggtggagcgggaggccgaggaatctcgggct
tcggacacgctcgacgacagcgaagatgaaccggcgcctccgcccccacccgtgatcatc
tccgaagccgacttcagggaaaaagttcgggagaagcgtgtgggcatcctgaagccgcag
gggtcgctggagcgcgcgcgggaggagcgtgccctcgccaccacgcaagacgaccaggga
gtcgaggaggacggtaaaggagaggacaagaaagaggctcgcaagccgcgcgtcaacatc
gcaatggccgccatcatgcgcaaacaagaagaaaccaacaagcaggtaaagtttgcgtcg
cctcctccgacgcccgattctgtaacagacgccagcgaatccagcgccaaagaagctgac
aagcccaaagtcctccagcctaaagctataaaatctttgacgaacttgcccatcggcaga
aaaaccggaggtattctctcccttaaagacaagtcagctggttaccctcatctagtgaac
accgatcccgaacctcctaagaaggctgataaagatgagaggaaagacactaaacccgtc
gcagccgtgaaccaaaccgcccaacaaaacttccaacccaagtggcaggagcacacgccg
cagacgtggccgatgccgcctcagcagttcaatgagccacgcatgggcttccagaagaac
tacggcatacagaacaccggcatcagctataaccccaactatcaagccgcgccgggcttc
gggcagggcatccggttgcccgtcgtcaatcccaaggaaatagacgttcgtacggccgcg
ctgcagaagcagacctcacgccccgagcttttccaggaggggcacaagttcaccaaccac
ggttaccaaatgtccggcgacaagaaaaatttcctcaacgaccttccgccgcgattcgcg
aaccaataccgctactggcagaatgcgcaggacaaccagcccggcgagaacaagttcagg
gacgactccttcaagagcaacgccttcgaacaacagccgctgcggaactggtctaaccag
cagcctgattaccaacaaccgatgacctggtggaagcccgagaacacacctcttttcaat
accaacttttctacccccataaacatccaacccaattacttctctccccacatctcttca
aatactccaaatccgtatctaaatcactcttacaaccagaaccaagggcaaaagctcgat
agtgttggcccaaactggcagcccactataggccagcctcagattccaacgctgcagaac
ttggtcacatcccccagcttcagcgcttctttgaataacttcgggtcgtacgcgccgagt
gtgggctacgacacgtccatgtacccccagttcagcagcaagctcggcttccagcccatg
caggtgaagacggagaaaccctaccagggtaaggagatggacgaagcggtgaacttcgcg
gcgagcgtcatggacatgcaacagaggaatatgaacttcaacgctgtgaatcaggatgca
ggcgtcgctagtccgttggatcaaattgggggctgtgagggcacttcggccggagctggc
aacacgtactcgctgttcagcgccgccacagagcccgcagcctggacccagcgccagccg
catcagtcgctgtggtccgggccgggaccctctccactcgagaggctcttggagcaacag
aagcaaatgaaacagccaccaacaccgcagtga
DBGET
integrated database retrieval system
