KEGG   Battus philenor (pipe-vine swallowtail): 137930482
Entry
137930482         CDS       T10485                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
bphi  Battus philenor (pipe-vine swallowtail)
Pathway
bphi03013  Nucleocytoplasmic transport
bphi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bphi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137930482 (thoc6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    137930482 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bphi03019]
    137930482 (thoc6)
   03041 Spliceosome [BR:bphi03041]
    137930482 (thoc6)
Messenger RNA biogenesis [BR:bphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     137930482 (thoc6)
Spliceosome [BR:bphi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137930482 (thoc6)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 DSE1_N NBCH_WD40 WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_Gbeta Beta-prop_IFT140_1st CBM_20 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_RIG_1st PAC11 PQQ_2 ASA1 PEP5_VPS11_N Beta-prop_WDR75_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 137930482
NCBI-ProteinID: XP_068629842
LinkDB
Position
Unknown
AA seq 325 aa
MLDKILYNTVLCQTFSPCGKYLIAGNIYGQIAVFDLDAIVHPVIELLTSDYNKPKHLHQL
ENENQITSLASTENFLIVGTVNEISGWDWKAILQTKLSKPTWTIKISLHSKFEQTDVNSL
WFCEQENKIYAGCGDDNVYVYNLEDGRRVNTLEGHKDYIHSVHGRGQQLITAGEDGLVML
WDIRSGKSYNKLEPHTNDKIARPDIGKWIGSASLEEDWIVCGGGPRLSLWHLRSLDAVTV
FDIPDHGIHVSFFHDDCVVAGGTAKHLYQLNYSGEVKVELPVSATTVYSAVLRTSPNKLL
SIAGSSPEIDICTSFKYRDQVLHFR
NT seq 978 nt   +upstreamnt  +downstreamnt
atgttggataaaattttatataacacagtattgtgtcaaactttttcaccttgtggcaaa
tatttaattgccgggaatatttatggacaaattgccgtttttgatcttgatgcaattgtc
catcccgtaattgagttactaacgtctgattataacaagccgaaacatctgcaccaatta
gaaaatgaaaatcagataaccagtctagcaagcacagaaaacttccttatagttggtaca
gtcaacgaaatatccggatgggattggaaagcgattttgcagactaaattaagcaaacct
acatggaccattaaaatatctttacactccaagtttgaacaaacggacgttaacagtttg
tggttttgtgagcaagagaataaaatttatgctggttgtggcgacgacaatgtctacgtt
tacaatttagaagatggacgacgtgtaaatactttagagggacataaagattatatacat
agtgtacatggaaggggtcaacagttgataacagctggtgaagatggcttagtgatgcta
tgggatatcagatcaggcaagtcctataacaaattggagccccatactaatgacaaaatt
gctagacccgatattggaaaatggattggatctgcttcattggaagaagactggatagtc
tgtggtggtggtcctcgtttgtcactttggcatctacgttctttggatgcggtcacagtt
ttcgacatcccagatcacggtatccacgtttccttcttccatgatgactgtgtggtggcc
ggcggaacagctaaacatctctaccaactaaattattctggcgaagttaaagtggaatta
cctgtatctgctacaacggtttattcagcagtattaagaacaagccccaataaattattg
tctattgccggatctagccctgaaatagacatttgcaccagtttcaaatatcgagatcag
gtgttacatttcagatag

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