Battus philenor (pipe-vine swallowtail): 137931580
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Entry
137931580 CDS
T10485
Symbol
Dis3
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137931580 (Dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bphi03019
]
137931580 (Dis3)
Messenger RNA biogenesis [BR:
bphi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137931580 (Dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
CSD2
Rrp44_S1
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
137931580
NCBI-ProteinID:
XP_068631123
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MWTTKTFLTKTKRGNILKIVREHYLRSDLLCGSSACNSCPHKDDEFVLDATPKSICALFD
YDHYLILDTNVVLHQIDVLEEDALTNVIILQTVLEEVKHQNGAIFQRLLEIIGKKKRKFY
SFVNEHHKDTYVERNPGEKANDRNDRAIRQAASWYASHLSINSLDGKFPQIVLLTDDEKN
RKLAQEEGIVCCSVKDYVENINGFVGLVDKLSKNVIPESCSKDALYPAHLTPSQIHTGIR
NGKLYQGTFHASRENYLEGSSVVTGFEKPILLQGLIGINRAVDGDIVAIEIFPKEEWRKP
SDIVLEDKADDQGDRLEEESELLTTVKPADPSNDEITPTGKVVGIIRRKWRQYCGILKPS
KFPGATRHLFTPAERKIPHVRIETRQSDVLASQRILVALDSWPRNSRYPLGHFVRSLGPI
GDKTAENEVILLEHDVPHARFSEAVLACLPPDDWTIPQEEINKRVDLRSLCICSVDPPGC
TDIDDALHARPIDGVTGSGLKKYEVGVHIADVTHFVRPNTALDKEAALRSTTVYLVDKRI
DMVPDLLSSNLCSLRGGEERLAFSCVWELDENANVLSTKFHKSVIKSRSAMTYEEAQLII
DDSSRSDEIASSLRVLNALAKKLKQKRLDNGALLLASPEIRFQVDSETHDPVEVQAKKIL
DTNSMVEEFMLLANVSVAECLAREFPQCALLRRHPSPPPAYFETFLKAAKQQGFELDVST
NKAFSKSLDTAVIPERPFFNTLLRIMATRCMQQAVYFSSGTRTQDEFYHYGLACPIYTHF
TSPIRRYADVIVHRLLAACIGADVTHATLLDGKYADALCENLNYRHRQAQYAGRASVALN
THILFKNRVEIESAVVLAVKRNALQVLIPKYGLEGPLYLPDDKFKYNEEEHFQVCDNIIL
KTFDELTVRLTLDSSNLQHRKLVFQLVKPHIPGFSYVPEEESSQMDVEVLEVKTIDEVSK
KKEQKKKPERKVSLESKIKKKHKKLHT
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgtggactacaaaaacttttctaacgaaaactaaacgcggcaatatcttaaaaatagtc
agagaacattatttgagaagcgatttactttgtggttcatcagcatgtaacagttgtcca
cataaagatgatgagtttgttttggatgcaacacccaagtctatttgtgcgctttttgat
tatgatcattatctaatattggacactaacgttgtattgcatcaaatagatgtgttagaa
gaagatgctcttacaaatgttattattttgcaaacagtactagaggaagtcaagcaccag
aatggtgctatatttcagagattattggaaataataggaaagaaaaaaaggaaattttac
tcatttgtcaatgagcaccataaagatacatatgttgagcgtaatcctggagagaaagca
aatgatagaaatgatcgtgcaatccgtcaagcagcgtcttggtatgcttcacatttaagc
attaacagcttagatggaaaatttccacagattgtattactgactgacgatgaaaaaaac
agaaaattagctcaagaagaagggattgtctgttgttcagttaaagattatgtagaaaat
attaatggatttgtcggacttgtggacaagttatcaaagaatgtaataccagaaagctgc
tcaaaggatgctctttatccagcacatttgactccaagtcagattcacacaggtattagg
aatggaaagttgtatcaagggacttttcatgcctcgagagaaaactatttggagggatcg
tcagttgttactggctttgagaaaccgattctattacaaggccttattggaattaataga
gctgttgatggagatatagttgcaatagaaatttttcccaaagaagaatggagaaaaccg
agtgacattgtattagaagacaaagcagatgatcaaggtgaccgcttagaggaggaatca
gaattgttgactactgttaaacctgcagatcccagcaacgacgaaatcacgcctactgga
aaagttgtaggaataatcagaagaaaatggagacaatattgtggtattttaaaaccgagt
aaatttccaggagcaactcgacaccttttcacgccggctgagaggaaaatcccccacgtt
cgaatagagacgcgacaaagtgatgttttggcttcgcaaagaatactcgttgcccttgat
tcttggccaaggaacagtcgctatccactaggacattttgttcgctctttggggcccatc
ggtgacaaaactgcggaaaatgaggttattttactggaacatgacgtacctcacgctcga
tttagtgaagcagtactggcttgcttgcctcccgatgattggacaataccacaagaggag
ataaataaacgtgtagatctgcgttcgttatgcatttgttccgtggacccgcccggttgc
acagacatagatgatgcactacacgcacgcccaatagatggcgttacaggtagcggctta
aagaagtacgaagtaggcgtgcacatcgctgacgtcactcacttcgtgcgccctaacact
gcgttggataaagaggctgctttgcgatctaccacagtttatctggtagataaaagaatt
gatatggttccagatttactaagctctaatctgtgttcgctgcgtggaggtgaagagcga
ttggcgttctcctgcgtatgggagttggatgagaatgcaaacgttttgtcaactaagttc
cacaaaagtgttataaagtcccgttctgcaatgacatatgaagaggcgcagttgatcata
gacgacagttcccgtagcgacgagatagcgagctcgttgcgtgtgctgaacgcgctcgct
aagaagctgaagcagaaacgtcttgataacggagccctgttgctggcttcaccggagata
cgattccaggtagattcggagacacatgatccagtggaagtgcaagcgaagaagatacta
gacaccaactctatggtggaagagtttatgttgctggccaacgtgagcgtggcagagtgc
cttgctagggaattcccgcagtgtgctctgctgcgacgacatccctctccaccgccggcc
tactttgaaacgttcctcaaagcagctaaacaacagggtttcgaattggacgtgtcgacg
aacaaagctttctcaaagtccctggacacggctgtgattccggagcggccgttcttcaat
acgctgctgcgtatcatggcgacgcgttgcatgcagcaagccgtgtacttctcgagcggc
acgcgcacgcaggacgagttctatcattacgggctcgcgtgccccatctacacacatttc
acttcacctatacggagatacgcggacgtaatagtgcaccggctgctggcggcgtgcatt
ggtgctgacgtgacgcacgccacgctgctcgacggcaagtacgcggacgcgctctgcgag
aacctgaactaccggcaccggcaggcgcagtacgcgggcagggcctccgtcgcgctcaac
acccacatattgtttaaaaacagagttgagattgagtcggcggtggtgttggcggtaaag
cgaaacgcacttcaggttctcataccgaagtacggtctggagggacctctgtacttgcca
gatgataagttcaagtacaatgaagaggaacattttcaagtatgcgacaatatcatttta
aagacatttgacgaactcacggtacgactgaccttggacagcagtaacttgcaacataga
aaactggtttttcagttagttaaaccacatatccctggattcagttatgtaccagaggag
gaaagttcgcagatggatgtagaggtattagaggttaaaactattgacgaagtgtctaag
aagaaagaacaaaaaaagaaacccgaacgaaaagttagtctggaatcgaaaatcaagaaa
aaacacaaaaaattacatacctaa
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