Blattabacterium sp. BPLAN (Periplaneta americana): BPLAN_455
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Entry
BPLAN_455 CDS
T00996
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bpi
Blattabacterium sp. BPLAN (Periplaneta americana)
Pathway
bpi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BPLAN_455 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpi03021
]
BPLAN_455 (rpoC)
03400 DNA repair and recombination proteins [BR:
bpi03400
]
BPLAN_455 (rpoC)
Enzymes [BR:
bpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BPLAN_455 (rpoC)
Transcription machinery [BR:
bpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BPLAN_455 (rpoC)
DNA repair and recombination proteins [BR:
bpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BPLAN_455 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ACX84068
UniProt:
D0J9P7
LinkDB
All DBs
Position
complement(466387..470616)
Genome browser
AA seq
1409 aa
AA seq
DB search
MNRKKNNKFNKITIRLASPESILKESHGEVLKPETINYRTHKPERDGLFCERIFGPVKDY
ECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHINLVVPVVHIWCFRSSPNKIGYLL
GLPSKKLEMIIYYERYVVIQGGEATRSDGSFFQKGDFLTEEEYLYVLNKLPKGNFYLEDT
DSKKFIAKMGGECIEDLLNRLDLDKLSLDLRNQAHNETSKQRRIEALKRLQVVESFREGK
KNGGNVSWMIIHILAVIPPELRPLVPLDGGRYAASDMTDLYRRVLIRNNRLKRLIEIKAP
EVILRNEKRMLQEAVDSLFDNSRKVSAVKSEANRPLKSLSDSLKGKQGRFRQNLLGKRVD
YSARSVIVVGPHLKLQECGLPKDMAAELYKPFIIRKLIERGIVKTVKSAKRIIDKRDPMI
WDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCAAFNADFDGDQMAV
HLPLSSGAILEAQLLMLASQNILNPANGSPITVPSQDMVLGLYYMTKPLVTSSKVKGKGL
IFYSPEEVEIAYNQNVVELHALIKVKVSVRKKETLFDQLIETTVGRVLFNQVVPKKVGFI
NESLTKKSLREIIGKILHLTDVPTTAKFLDDIKELGFYNAFKGGLSFGLGDIIIPSDKKN
MVNYAIKQVDNVKMNYNMGLITNNERYNQVIDIWTNTNAMLTEKVMKQMREDRHGFNPVY
MMLDSGARGSKEQIRQLSGMRGLMAKPQKAGSSGGEIIENPILSNFREGLSILEYFISTH
GARKGLADTALKTADAGYLTRRLVDAAQDVIIKMEDCNTLRGLEISALKKNEEVVETLFD
RILGRISLNDLFHPKNNELIVDSGEMIDERIADLIEKSGIEFVEVRSPLTCEAKMGICSK
CYGRNLSTGKIVQKGEAVGVIAAQSIGEPGTQLTLRTFHVGGTAGNITESSQIRTKYDGI
IEFEDLKIVQIKNDYGEKVGVVVSRSTEMKLFNKNKSSVLMINNIPYGATLYVKHGDELK
EGDLICQWDLYNAVIVAEYTGKISYQHLEQGVTFQVEIDEQTGFQEKVITEVRNKNLIPT
LKILDENDEELKIYNLPVGAHLMVEDQEKIKVGKILVKVPRRSAKSGDITGGLPRLSELF
EARNPSNPAVVSEMDGIVSHGKIKRGNREIIVESKTGEIRKYLVKLSNQILVQENDYVKA
GMPLSDGAVTPNDILNIRGPRAVQEYLVKEIQEVYRLQGVKINDKHFEVIVLQMMRKVEV
IEVGDTKFLEGNIEYKDDFIEENDRIFQMKVVENPGDSSNFKSGDLISYRDFRNENAVLK
YKNKKLMKTRNAIPATARPILQGITKAALQTKSFISAASFQETTKVLSEAAISSKTDHLY
GLKENVIVGHKIPAGTGLREYENPDVEIL
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaaaaaaaataacaaatttaataaaattactattcgattagcttctccagaa
tctatattgaaagaatctcatggagaggttttaaaaccggaaactatcaattatagaact
cataaaccagaaagggatggtcttttttgtgaacgaattttcggtccagttaaggattat
gaatgtgcttgtggaaaatataaacgaatccgttacaaaggaattgtttgtgatagatgt
ggagtagaagtaaccgagaaaaaggtaagaagagaacgcatggggcatattaatttggtg
gttcccgtggttcatatttggtgttttcgttcttcccctaataaaataggttatttatta
ggattaccatctaaaaagcttgagatgattatttattatgaaagatatgtggtaattcag
ggaggggaggctactcgttcagatggttccttttttcaaaaaggcgattttcttacagag
gaagagtatttatatgttttaaataaactcccaaaaggaaatttttatttagaagatacg
gattctaaaaaatttatagctaagatggggggtgagtgtatagaagatcttttgaatcgt
ttagatttagataaattatctcttgatttgagaaatcaagctcataatgaaacttctaaa
caaagaaggattgaagctttaaaacgtttacaagtagtagaatcttttagagagggaaaa
aagaatggcggaaatgtttcttggatgattattcatattttagctgttattcctcctgaa
ttacgtcctcttgttcctctagatggaggtcgttatgcggcttctgatatgacggattta
tatcgtcgtgttcttataagaaacaatcgtttaaaaaggcttatagaaattaaggctcct
gaagttattttacgaaatgagaaaaggatgcttcaagaagctgtagattctctttttgac
aattccaggaaagtatccgcagtgaaatctgaggcgaatcgtcctttaaaatccttatct
gattctttaaaaggaaaacaaggtcgtttcagacaaaatcttcttggaaagagagtagat
tattctgctcgctcagttattgtagtagggcctcatttaaaattacaggagtgtggactt
cctaaagatatggccgctgaactttataaaccttttattatacgaaagttaattgaaaga
gggattgtaaaaactgtaaaatctgctaaaagaattatagacaaaagagatcccatgatt
tgggatattttagagaatgtcttaaaaggacatcctgttttgttgaatagagcaccaact
ttacatagattaggaattcaagcttttcagccaaaattgatagagggaaaagcaattcaa
ttacatcctttggtttgtgctgcttttaacgcagattttgatggagatcaaatggccgtt
catcttcctttatcttctggagctattttagaagctcaacttcttatgttagcttctcag
aatattttaaatcctgccaatggttctcctattactgttccatctcaagatatggtatta
ggtttatattacatgactaaacctttagttacttctagtaaagtaaaaggaaaaggactt
attttttattctccagaagaggtagaaatagcatataatcaaaatgtggtggaattacat
gctctaataaaagtgaaagttagtgttcgaaagaaagaaactttgtttgatcaattgata
gaaactactgtaggaagagttttatttaatcaagttgttcctaaaaaagtaggattcatt
aatgaatcccttacaaaaaaatctttaagggaaattattggaaaaatcttgcatttaaca
gatgttcctactactgcaaaattcttagatgacatcaaagaattaggattttataatgct
ttcaaaggaggtctttcttttggattaggagatattatcattccaagtgataaaaaaaac
atggtaaattatgctataaaacaagtagacaatgtgaaaatgaattataatatggggtta
ataacaaataacgaacgttataaccaagttattgatatatggacaaatacaaatgctatg
ttaacagaaaaagtaatgaagcagatgcgtgaagatagacatggttttaatcccgtatat
atgatgttagattctggagcaagaggatccaaggaacaaattcgtcagctttctggaatg
cgcggattaatggctaaacctcaaaaagcaggatcttctggtggagaaattattgaaaat
cctattttgtctaattttagagaaggactttctattttagagtattttatatctactcat
ggagctcgtaagggattggctgatacagcattgaaaacggcagatgctggatatttgaca
agacgtctagtagatgctgctcaagatgtaattataaaaatggaagattgtaacacgtta
cgtggtttagaaatatcagcattgaaaaaaaacgaagaagtagttgaaactttatttgat
agaattttgggacgtatatctttaaatgatctttttcatccaaaaaacaatgaattaata
gttgattctggagaaatgattgatgaaagaattgcagatttaattgaaaaatctggaata
gagttcgtggaagtacgttctcctcttacttgtgaagctaaaatgggtatttgttctaaa
tgttatggacgtaatctgtctacaggaaaaatagttcaaaaaggagaagctgtaggagtt
atcgccgcacaatccattggagaaccgggaacccaattaactttacgtacttttcatgtt
ggaggaacagctggaaatatcacagaatcttcacagatacgaacaaaatatgatggaatt
atagaatttgaggatttaaaaattgttcaaattaaaaatgattatggagaaaaagttgga
gtggtagtttctcgttctacagaaatgaaactatttaataaaaataagtcatctgtttta
atgattaataatattccttatggagctactttatatgttaaacatggggatgagttaaaa
gaaggagatctaatttgccagtgggatctgtataatgccgttattgttgcagagtatact
ggaaaaatttcttatcaacatttagaacagggggtgacctttcaagtggaaatagatgag
caaactggatttcaagaaaaagttattacagaagtaagaaataaaaatttaatacctaca
ttaaaaattttggatgaaaatgatgaagaattgaagatttacaatttaccagtaggtgct
catttaatggtagaagatcaagagaaaataaaagtaggaaaaattttggttaaagttccc
aggaggtccgctaagtctggagatattacaggaggattgcctcgtttatctgaattattt
gaagctcgtaatccttctaatccggctgtagtatcagaaatggatggaatagtcagtcat
ggaaaaataaaaagaggaaatagagaaattatagtagaatctaaaacaggggaaattaga
aagtatttagtaaaactttctaatcaaattctagttcaagagaatgattatgtaaaagca
ggaatgcctttatccgatggagcagttactccgaatgatattttaaatataaggggacca
agagctgttcaagaatatttggtaaaagaaatacaagaagtatatcgtttgcaaggtgtt
aaaattaacgataagcattttgaagtaattgttttgcaaatgatgcgtaaagtagaagtg
attgaagtaggagatactaaatttttagaaggaaatattgaatataaggatgatttcata
gaagaaaatgatagaatttttcaaatgaaagtagttgaaaatcctggagattcttcaaat
tttaaatctggagatttgattagttatagagattttcggaatgaaaatgctgttttaaaa
tataagaataagaaattgatgaaaactagaaatgctataccagctactgcaagacctata
ttacaagggataaccaaagcagctttgcagactaaatcttttatatctgcagcttctttt
caagaaacaactaaagttttaagtgaagcagctataagtagtaagactgatcatttatat
ggattaaaggaaaatgtaattgtaggacataaaatacctgcaggaactggattaagagaa
tatgaaaatccggatgtagaaattttgtaa
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