Blattabacterium sp. BPLAN (Periplaneta americana): BPLAN_529
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Entry
BPLAN_529 CDS
T00996
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bpi
Blattabacterium sp. BPLAN (Periplaneta americana)
Pathway
bpi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BPLAN_529 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpi03021
]
BPLAN_529 (rpoD)
Transcription machinery [BR:
bpi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPLAN_529 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r2
DnaB_bind
Sigma70_r4_2
Relaxase_C
GPW_gp25
PF0610-like_N
DUF2175
Motif
Other DBs
NCBI-ProteinID:
ACX84134
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Position
548000..548863
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRESESLDKYLHEIGKIPLLTPEEEVEYARRAREGDSSAIEKLVNANLR
FVVSVAKQYQNQGLSLCDLINEGNLGLIKGILRFDETRGFKCISYVVWWIRQAILQAIAE
QSRSIRQPTNKLALLNKILKTLAQLEQELQRTPSAREIAEHLDMNEKDVEESIKNSGRHV
SMDAPLIEGEDSNLYDLVRSDESPRPDEHLERESLRKDIKRILETLSERERRVIILHFGL
NGSPPMTLEEVGQSCDLTRERVRQIESIALKRLKHSSRSKILKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattactaaacaagtaacaaatcgtgaatctgaatcattagataaa
taccttcatgaaataggaaaaattcccctattgaccccggaagaagaagttgaatacgct
cgtagagcaagagaaggagattcttctgctatagaaaaacttgttaatgcaaatttacgt
tttgtagtttctgtggctaaacaatatcaaaatcaaggattaagtttatgtgatttaatt
aatgaaggaaatttaggtttaataaaaggaattttacgttttgatgagactagaggattt
aaatgtatttcttatgtggtttggtggatcagacaagctattttacaagctatagcagaa
cagtcccgttcgattcgtcaacctacaaacaaattagctttattgaacaaaatactaaaa
actctagctcaattagaacaagaacttcaaagaacgccttctgcaagagaaatagcagaa
catttagatatgaatgaaaaagatgtggaggaatctatcaaaaattcaggaagacatgtt
tctatggatgctcctttaatagaaggagaggattctaatttgtatgatttggtaagatcc
gatgaatctcctcgtccagatgagcatttagaaagagaatctcttcgtaaagatataaaa
agaattttggaaactttaagcgaaagagaacgtcgtgttattatattacattttggattg
aatggatctccacctatgaccctggaagaagttggacaatcttgcgatttaaccagagaa
cgagtaagacaaattgagagcatagctttaaaaagattgaaacattcttctagaagcaaa
atcctcaaaccttatttaggataa
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