Brachyspira pilosicoli P43/6/78: BPP43_00065
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Entry
BPP43_00065 CDS
T02387
Name
(GenBank) putative DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bpip
Brachyspira pilosicoli P43/6/78
Pathway
bpip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpip00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BPP43_00065
09124 Replication and repair
03420 Nucleotide excision repair
BPP43_00065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpip03021
]
BPP43_00065
03400 DNA repair and recombination proteins [BR:
bpip03400
]
BPP43_00065
Enzymes [BR:
bpip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BPP43_00065
Transcription machinery [BR:
bpip03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BPP43_00065
DNA repair and recombination proteins [BR:
bpip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BPP43_00065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
NTPase_1
Gpos_C8-like
Motif
Other DBs
NCBI-ProteinID:
AGA65381
UniProt:
A0A3B6VHF7
LinkDB
All DBs
Position
12193..13890
Genome browser
AA seq
565 aa
AA seq
DB search
MNNNAPIIVQGDGTILLDVSTEHFEEIRNFLLVFAELVKSPEYIHTYRITLVSLWNAASL
NYTAQSIIDFLKKYSSYDIPKNIVKQIESSISKYGRIKIIKEDDDKYYLVSDDESIIEEV
LHYKAMVKYIKREVNDNKIEIDPIYRGHIKLALINIGYPVEDLAGYKTGEEYHFNLRNKL
LSNGEDFSLREYQLNAIEAFYANGRPEGGAGVIALPCGTGKTVVGIAAMSKMQTKTLIIV
TGVTACRQWRDEILDKTDIPKEDIGEYNGLNKEIKPITIATYKILTYRKDKESPFVHFEL
FFKHNWGLIIYDEVHLLPAPIIKLTSEIQSMRRLGLTATLVREDGLEKDVFCLIGPKKFD
MPWRELEEKKFIAEAYCYDLRIPLDNEQRADYVVSSDKVKFRIASENILKYEIVKKIIKK
LEGKNILIIGQYLNQLNEMKRQTGYTIITGKTPQAERDEIYKKFKSGEIKILIVSKVANL
AVDLPDANVLIQISGTFGSRQEEAQRLGRVLRPKKGENKSYFFSVITSDTKEEDFSHKRQ
LFLTEQGYHYELLDMASFEELTFSK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
ttgaataataatgctcctatcatagttcagggcgatggtactattttattagatgtaagt
acagagcattttgaagaaataagaaattttttgcttgtatttgcagagcttgtaaagagt
cctgaatatattcatacatatagaattacattagtatcattatggaatgctgctagtttg
aattatacagctcagtctataatagattttttaaagaaatattcttcttatgatatacca
aaaaacattgtaaaacaaatagaaagcagtatatcaaaatacggaagaataaaaattatt
aaagaagatgatgataaatattatcttgtaagcgatgatgaaagcattatagaagaagta
ttgcattataaggcaatggtaaaatatattaaaagagaagttaatgacaataaaatagag
atagacccaatttacagaggtcatataaaattagctcttataaatataggataccctgta
gaagatttagctggttataaaacaggagaagagtatcattttaatttaagaaacaagctt
ttatctaatggtgaagatttttctttgagagagtatcaattaaatgcgatagaagctttt
tatgcaaatgggcgtcctgagggtggggctggtgttatagctttgccttgcggtactggt
aaaactgttgtaggaatagctgctatgagtaagatgcagacaaaaactcttataatagtt
acaggggttacagcttgcagacagtggagagatgagatattagataaaacagatatacca
aaagaagatattggcgagtataatggactcaacaaagaaataaaacctataacaatagct
acatacaaaatacttacatatagaaaagacaaagaatctccttttgtgcattttgaatta
ttttttaagcataattgggggcttataatatatgatgaggttcatttgcttcctgctcct
ataataaagcttacaagtgagattcagagtatgagaaggcttgggcttactgctacttta
gtgcgcgaggacgggcttgaaaaagatgtattttgtcttattggacctaagaagtttgat
atgccttggagggagcttgaagagaagaagtttattgctgaggcttattgttatgatttg
agaataccgcttgacaatgagcagagggctgattatgtggtttctagcgataaagtgaag
tttagaattgcaagcgaaaatatacttaaatacgaaatagttaaaaaaatcatcaaaaaa
ctagaaggcaaaaacatactaattatagggcagtatttaaatcagcttaatgagatgaaa
agacaaactggatatacaatcattacaggtaaaactcctcaagctgaaagagatgagatt
tataaaaagtttaagtctggtgaaataaaaatacttatagtaagcaaagtagctaatttg
gcagttgatttgcctgatgctaatgtattaatacagatatctggtacttttggttctaga
caggaagaagctcaaaggttaggacgtgttcttcgtccgaaaaaaggtgaaaataaaagc
tatttcttttcggttattacaagcgatacaaaagaagaagatttctctcataaaagacaa
ttatttcttacagagcagggatatcattatgagcttttggatatggcttcttttgaagag
cttactttttcaaaataa
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