Brachyspira pilosicoli P43/6/78: BPP43_04820
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Entry
BPP43_04820 CDS
T02387
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bpip
Brachyspira pilosicoli P43/6/78
Pathway
bpip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPP43_04820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpip03400
]
BPP43_04820
DNA repair and recombination proteins [BR:
bpip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPP43_04820
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BPP43_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
MAAL_C
Motif
Other DBs
NCBI-ProteinID:
AGA66234
UniProt:
A0A3B6VM74
LinkDB
All DBs
Position
1004830..1006869
Genome browser
AA seq
679 aa
AA seq
DB search
MKSFKIESNFKPSGDQITAIDSLVKGLENKNKYQTLLGVTASGKTFTIANVIEKANRPTL
VMSHNKTLAAQLYRELKDFFPNNAVEYFVSYYDYYQPEAYVPAKDLYIDKDASVNDEIDR
LRLKATTSLLERRDVIIVASVSCIYGLGSPEDYRKLYIAIEKDGEYDRDEIIEKLVSIQY
ERVKDVLERARFKVMGDTLEIMSAYSDEVIRVEFFGDTVERIIKINPITRQKIAEQDRVV
IYPAKHFVTGGDKLAAGIKLIEEELEEQYNKFKSEGKLVEAERIYGRTKYDLEMLREVGY
CAGIENYSRPLSGRKEGDRPACLIDYFPKDFLTIIDESHVSVPQIRGMFFGDRSRKETLV
KYGFRLPSALDNRPLFFEEFESLTNDTIYISATPAEYELKKSSQVVEQIIRPTGLLDPII
EVYPINGQIDRILEEIKKTVSNNERIFITTLTKKMAEDLTKYLNENGVRTRYLHSDIQTV
ERVEIIRDLRLGAFDVLVGINLLREGLDVPEVSLILILDADKTGFLRNTTTLIQTIGRAA
RNANGRVIMFADTISDAMKVAIEETERRRKIQMDYNKEHNITPKTIIKKIQDIIEREEKV
ETSYELHFDFRRFNERVKIDPEQKSDDYIKELEKEMKKASDSLEFEKAIEIREKINQLKQ
LKPAKKSVHKNITSKKAKH
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttttaaaatagaatcgaatttcaagccttcaggagaccaaataacagcaata
gactctttagttaaagggcttgaaaataaaaataaatatcaaacactgctcggagttact
gcaagcggaaagacattcactatagcaaatgttatagaaaaagcaaaccgccctactctt
gtaatgtcgcataacaaaactttggcagcacagctttacagagaattaaaagacttcttt
ccaaacaatgcagttgaatatttcgtttcttattatgactactatcagcctgaagcatat
gttcctgctaaggatttatatattgataaagacgcctcagttaatgatgagattgacagg
ctaagacttaaagctactacttcgcttcttgaaaggcgagatgttataattgttgcttct
gtttcatgtatatatggtttgggttctcctgaagattatagaaagctctatatcgcaata
gaaaaagacggagaatatgacagagatgagataatcgaaaaattagtgtctatacaatat
gaacgtgttaaagatgtgcttgagagggcaagatttaaagtaatgggagatactttagag
ataatgagtgcctattctgatgaggttataagagtagagttttttggagataccgttgaa
cgcatcataaaaattaaccctatcacaagacaaaaaattgccgagcaagatagagttgta
atatatcctgcaaaacacttcgttacaggcggagacaaattagcagcaggaataaaatta
atagaagaagaacttgaagaacaatataataaatttaaatccgaaggaaaattggtagaa
gctgaaagaatatatggaagaacaaaatatgacttagaaatgcttagagaagtgggatac
tgtgcaggcatagaaaactactctcgcccattgtcaggacgtaaagagggagatagacct
gcttgtttgatagactattttccaaaagattttttaacgataatagatgagtcgcatgtg
agtgttcctcaaattagaggaatgttttttggagatagaagcagaaaagagactttagta
aaatatggttttaggcttccttcagcattagacaatcgtccattattttttgaagagttt
gaaagcctcactaatgatacaatatatattagtgctactcctgcagaatatgaacttaaa
aaaagcagccaagttgtagagcagataattcgccctacaggactccttgaccctataatt
gaagtatatcctataaacggtcaaatagacagaattcttgaagagataaaaaaaacagta
tccaacaacgaaagaatatttataacaacactcacaaaaaaaatggcagaagacctcaca
aaatatttaaatgaaaatggtgttagaactcgttatttgcattcagacattcaaacagtt
gagcgtgttgagataataagagatttgaggcttggggcttttgatgtgcttgtgggtatt
aaccttttaagagaggggcttgatgtacctgaagtatcactcatactaatacttgatgcc
gacaaaacaggttttttaagaaataccactactctaatacagactatagggcgtgctgca
agaaatgctaacggcagagtgataatgtttgcagacactataagcgatgctatgaaagta
gccattgaagagacagaaagaagaagaaaaatacaaatggactacaacaaagagcataac
atcactccaaaaacaataatcaaaaaaatacaagatataattgaaagagaagaaaaagtt
gaaacttcttatgagcttcattttgactttagacgcttcaatgaaagagtaaaaattgac
ccagaacaaaaaagtgatgattatataaaagagcttgaaaaagagatgaaaaaagcttca
gacagtttagagtttgaaaaggctattgaaataagagagaaaataaatcagcttaaacaa
ttaaagccggcaaaaaaatctgtgcataaaaatatcacttcaaaaaaggctaaacattaa
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