KEGG   Brachyspira pilosicoli P43/6/78: BPP43_05380
Entry
BPP43_05380       CDS       T02387                                 
Name
(GenBank) formamidopyrimidine D-glycolase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bpip  Brachyspira pilosicoli P43/6/78
Pathway
bpip03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bpip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BPP43_05380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpip03400]
    BPP43_05380
Enzymes [BR:bpip01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BPP43_05380
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BPP43_05380
DNA repair and recombination proteins [BR:bpip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BPP43_05380
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco Ribosomal_S13 NFACT_N
Other DBs
NCBI-ProteinID: AGA66328
UniProt: A0A3B6VKM6
LinkDB
Position
1126291..1126944
AA seq 217 aa
MKELPYLINLINALKGEICYSYINNVVALDKKYKELEEVKGQKIIDVLRHGGYMHFQFSQ
DAMLVDLGSGGSFVLTENNTYKNAIIKLETDNGNFFVVDESKDKDDATHIIPIWKDYTTM
PQVGYDPLTKQFNYNLFCQLLADNATTVEKLIKNPLIISGIGDTYGDMILKRASITKRTK
TTDINKAKAREIFDAIKQVLREASGNRDEEESEDSED
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaaagaactaccatatttaatcaatttaattaatgcattgaagggcgagatttgttat
tcttatattaataatgttgttgctttagacaaaaaatataaagagcttgaagaagttaaa
ggacaaaaaattatagatgtattaagacatggcggatatatgcattttcaattctcacaa
gatgctatgcttgtagacttgggttctggaggctcttttgtacttacagaaaacaacact
tataaaaatgcaataatcaaattagaaactgataatggcaatttctttgttgtagatgag
agtaaagataaagatgatgctacacatattatacctatatggaaagattatactacaatg
cctcaagtaggttatgaccctctcactaaacaatttaattataatttattttgtcaatta
cttgcagataatgccacaactgtagaaaaacttattaaaaaccctctcataataagcggt
ataggagatacttacggagatatgatattaaaaagggcttctattactaaaagaactaaa
actacagatataaacaaagcaaaagcaagagaaatttttgacgctataaaacaagtattg
agagaggcctctggaaatagagacgaagaagaaagcgaagattctgaagattaa

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