Brachyspira pilosicoli P43/6/78: BPP43_06040
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Entry
BPP43_06040 CDS
T02387
Name
(GenBank) 2-5 RNA ligase LigT
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bpip
Brachyspira pilosicoli P43/6/78
Brite
KEGG Orthology (KO) [BR:
bpip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpip03016
]
BPP43_06040
Enzymes [BR:
bpip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BPP43_06040
Transfer RNA biogenesis [BR:
bpip03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BPP43_06040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
CEP63
Motif
Other DBs
NCBI-ProteinID:
AGA66452
UniProt:
A0A3B6VPW1
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All DBs
Position
1270239..1270769
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AA seq
176 aa
AA seq
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MRAFLALNIDENIKNKYHNLLLKKIDDNIAEVKFVNKNKMHITLVFFENIKESDIEKIKS
SLEKTSNIIKPFNILFEKLSYFTNKFNDINVLFVKANCKELDEYVKHLRDNINIKYDKKD
FKSHLTLARVKKVYDNDKLKEIINNISFEKSSFLANSITLYESDFVNYKEIFTVTF
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgttcttagcattaaatattgatgaaaacataaaaaataaataccataatctt
ttactaaaaaagatagatgataatatagcagaagtgaaatttgtaaataaaaataaaatg
catatcacattagttttttttgaaaatataaaagaaagcgatatagaaaaaataaaatca
tcattagaaaaaacaagcaatataataaagccttttaatatattatttgaaaaactctca
tatttcacaaataagtttaatgatataaatgttttgtttgtaaaagcaaattgcaaagaa
ttagatgaatatgtaaagcatttaagagataatattaatataaaatatgacaaaaaagat
tttaaatctcatctcacattggcaagagtaaaaaaggtttatgataatgataaattaaaa
gagataataaataatattagttttgaaaagagcagttttttagcgaactctatcacactt
tatgaaagcgactttgttaattacaaagaaatattcacagtaacgttttga
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