Brachyspira pilosicoli P43/6/78: BPP43_08490
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Entry
BPP43_08490 CDS
T02387
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpip
Brachyspira pilosicoli P43/6/78
Pathway
bpip03420
Nucleotide excision repair
bpip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPP43_08490
03430 Mismatch repair
BPP43_08490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpip03400
]
BPP43_08490
Enzymes [BR:
bpip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BPP43_08490
DNA repair and recombination proteins [BR:
bpip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPP43_08490
MMR (mismatch excision repair)
Other MMR factors
BPP43_08490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
AAA_22
Terminase_6N
DUF3253
Motif
Other DBs
NCBI-ProteinID:
AGA66891
UniProt:
A0A3B6VLT3
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All DBs
Position
1778719..1780719
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AA seq
666 aa
AA seq
DB search
MDNNKQNDLLNGLNENQKEGVLHIDSPLLLLAGAGSGKTLVITKKIAYLITEKHIRPENI
MAVTFTNKAANEMKERVCSMLPEIKPFRLFIRTFHSACLRILKDNAQYLNYREDFLILDE
GDRLSVIKKIMKEENTPKSIKPKDVSRYISAKKNEMRYDIGFEEEYYKKVYDKYKEYEVK
ENVMDFDDLILNTIKLFEKEKNILEFYQKRFKYILVDEFQDTNLQQYKLIKMLTQKNNNK
ETDNQLTVVGDDDQSIYAFRGANVSNILNFENDFENTKIIRLEENYRCPKNVVEVALNVI
KNNSHRHTKNVFSNKKSDYKIENWICYTDYEEAKSVANEIELLFDEGFEAKDIVILFRTN
SQSRAYEKELMAHSINYKIVGGVGFYERAEIKDSISFLRLLTGFNDNFSIRRTINTPTRG
IGEKTFAQFEAFADKKNLTLYDAIDIIEESNISKKALNNIKEYKNILEKYSKKIEEDPKH
IEGVFFEFLKEIDYFSIFKSEGNIRIATAEDNIKELFNAYYSYLNYNYENPESSLNIRGF
LEETTLYKDNSNEDKEDAITLMTVHNAKGLEFEVVFITGLEHGVFPHYFSLEEENGIEEE
RRLFYVAITRAKQKLYLTYAKRRRISSGTMEQAPSSFLMEIPKSLLYIKEKANSYYIEID
EDAFDY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggataataataaacaaaatgatttacttaatggtttaaacgaaaatcaaaaagaaggt
gtgcttcatatagatagtcctcttcttctcttggcaggtgctggaagcggtaagacttta
gttatcacaaaaaagatagcataccttataacagaaaaacacataaggccagaaaatata
atggctgtaacttttacaaataaagcagctaatgaaatgaaagaaagagtatgctctatg
cttccagaaataaaaccatttaggctttttataagaacatttcactctgcatgtttgaga
atattaaaagataatgctcaatatttaaattatagagaagactttcttattttggacgag
ggcgatagattaagcgttataaaaaaaataatgaaagaagaaaacactccaaaatctata
aagccgaaagatgtttcaagatatatatctgccaaaaaaaatgaaatgagatatgatatt
ggttttgaagaagagtattacaaaaaagtatatgataaatacaaagagtatgaagttaaa
gaaaatgtaatggactttgatgatttaatactcaacacaataaaactatttgaaaaagaa
aaaaatatacttgagttttatcaaaagagatttaaatatattttagttgatgagtttcaa
gatacaaatttgcagcaatacaaattaataaaaatgcttactcaaaaaaataataacaaa
gaaacagataatcaattaactgttgtaggcgatgatgaccagagtatatatgcctttagg
ggagcaaatgtatctaatatattaaactttgaaaatgattttgagaacactaaaataatt
cgccttgaagaaaattacagatgccctaagaatgtagttgaagtggctttgaatgtaata
aaaaataatagccatagacacacaaaaaatgttttttcaaacaaaaaaagcgattataaa
atagaaaattggatatgctatacagattatgaagaggcaaaatcggttgctaatgaaatt
gaattattgtttgatgaaggttttgaagcaaaagatatagttattttgtttagaaccaac
agccaatcaagagcatacgaaaaagaacttatggctcattctattaattataaaatagta
ggaggcgttggattttatgagagagcagaaattaaagacagcatttcttttttgagactt
cttacaggttttaatgataactttagcataagaagaactatcaatacaccaacaagagga
ataggagaaaaaacttttgcccaatttgaagcatttgcagataaaaaaaatctcacactc
tatgatgcaatagatattatagaagaatctaatatttcaaaaaaagctcttaacaatatt
aaagaatataaaaacatattagagaaatattcaaaaaaaatagaagaagaccctaagcat
atagaaggagtattttttgagtttctaaaggaaatagattatttttcaatatttaaaagc
gaaggcaatataagaatagcaacagcagaagataatataaaagagctttttaatgcatac
tacagttatttaaattacaattatgaaaacccagaaagcagtttaaatataagaggattt
ttagaagagacaacactatacaaagacaacagcaacgaagataaagaagatgcaattact
cttatgacagtacacaatgccaaaggcttagagtttgaagttgtatttattacagggctt
gaacatggagtttttcctcattacttttcactagaagaagaaaacggcatagaagaagag
agaagacttttttatgtagcaattacaagagctaaacaaaaactatacctcacatacgca
aaaagaagaagaataagctcaggcactatggaacaagctccttcatcatttttaatggag
ataccaaaatctttattatatataaaagaaaaggctaatagctattatatagaaatagat
gaagatgcattcgattattaa
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