Brachyspira pilosicoli P43/6/78: BPP43_08860
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Entry
BPP43_08860 CDS
T02387
Name
(GenBank) ATP dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpip
Brachyspira pilosicoli P43/6/78
Pathway
bpip03420
Nucleotide excision repair
bpip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPP43_08860
03430 Mismatch repair
BPP43_08860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpip03400
]
BPP43_08860
Enzymes [BR:
bpip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BPP43_08860
DNA repair and recombination proteins [BR:
bpip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPP43_08860
MMR (mismatch excision repair)
Other MMR factors
BPP43_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
LepB_GAP_N
ResIII
DEAD
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
AGA66959
UniProt:
A0A3B6VYL8
LinkDB
All DBs
Position
complement(1856401..1858392)
Genome browser
AA seq
663 aa
AA seq
DB search
MALMLNEEQKKAVEHINGPMLALAGAGSGKTRVITERIAYLIKNGIDPSNILAVTFTNKA
ANEMRERIAALLKEKPKQLVISTFHSFCVRVLKLDIDKLGYKKNFSIYSSSDSRTLIRNI
LREVKVNTLNYDENLFAWYIDRYKNNLMKPNEVVPHDDLEKIAKRVYEVYQNYLKGYNAV
DFNDLINLTIDLYINFPDVLDKYQERFKYIMVDEYQDTNLAQYKLTSLLASKYKNIVVVG
DDDQSIYAFRGADVSNILSFENEYPEAKIITLNKNYRSTKAILEAAHAVISNNTQRKAKE
VVAVNDEGIPPVIMPCEDERDEAQFIAENITQTAINKNLNYENFAILFRMNSQSRIFEEA
LRFRGIPYTVVGAFQFYERKEIKDILAYLNLFVNPEDEVSLLRVINIPKRGIGAVAINNL
NEISIKNGVSLYQTLLDYENIDDIPPKAKTGIKDFLDIIHYYNEIFTVDKNTLEKPKLYE
NINKFLDTIAYHNEVLNSSDTKEQGSKKIENIESLMNGIAEYEKGNKNATLKNYLDRILL
MSIEENNEEEKKKGVMLMSIHAAKGLEFPYVYICGMEDGILPHHKSSSEREIEEERRLCY
VAMTRAKKHLTLTYCMKRKKQGRDVECTPSIFLEEMRKGLPEDMAMDEEEFFSNLKATLK
PDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcattaatgttaaatgaagagcaaaaaaaagctgtagagcatattaatggacctatg
cttgcattagccggtgcaggaagtggtaagaccagagtaattacagagagaattgcctat
ttaataaaaaacggaatagaccctagcaatatacttgctgttacttttacaaataaagct
gctaatgaaatgcgtgagagaatagctgctttgcttaaagaaaaacctaaacaattagta
ataagtacttttcattctttttgtgtgagggtgcttaagcttgatatagataaattagga
tacaaaaaaaactttagtatatattcttcttcagacagcagaactcttataagaaatatt
ttgagagaggttaaagtaaatactcttaattatgatgaaaacctctttgcttggtatata
gacagatacaaaaacaatttaatgaagccaaatgaagtagtgcctcatgatgatttggag
aagattgcaaaaagagtttatgaggtttatcagaattatttgaaagggtataatgctgtt
gattttaatgatcttattaatttaactattgatttatatattaattttcctgatgtttta
gataagtatcaagagagatttaaatatattatggttgatgaatatcaagacaccaattta
gcacagtataaactcacaagccttttagcttcaaaatataaaaatatagttgtagtaggc
gatgatgaccagagtatatacgcttttaggggtgctgatgtatcaaatatactttctttt
gaaaacgaatatccagaggctaaaataattacattaaacaaaaattatagaagcactaag
gcaatacttgaagcggcacatgctgtaataagcaacaatacgcaaagaaaagcaaaagag
gttgttgctgttaatgatgaaggtatacctcctgttattatgccctgcgaagatgagaga
gatgaagcacagtttatagcagaaaatatcacacaaactgcaataaacaaaaatttaaac
tacgaaaactttgccatactttttagaatgaactctcagtcgcgtatttttgaagaggct
ttaagatttagaggcattccatatactgttgttggtgcttttcagttttatgagagaaaa
gagattaaagatatacttgcatatttaaacctatttgttaatccggaagatgaggtttct
cttttgagggttattaatataccaaaaaggggaattggtgctgttgcaattaataatctc
aatgaaataagtataaaaaacggagtatcattatatcaaacattacttgactatgagaat
atagatgatatacctccaaaggcaaaaacaggaataaaagattttttggatatcattcat
tattataatgaaatatttacagttgataaaaacacattagaaaaaccaaagctctacgaa
aacattaataaatttttagatacaattgcatatcataatgaagtattaaactcaagcgat
acaaaagagcagggaagtaaaaaaatagaaaacattgaatctctaatgaacggtatagct
gaatatgagaaaggaaataaaaatgctactttaaaaaattatttagatagaatactttta
atgagcatagaagaaaataatgaagaagagaaaaagaaaggtgtaatgcttatgagtata
catgctgcaaagggtttagagtttccttatgtttatatatgcggcatggaagacggcata
cttccgcatcataaaagttcatcagagagagagatagaagaagagagaagactttgctat
gttgctatgacgagggcaaaaaagcacctcacattaacatattgcatgaaaagaaaaaag
caaggaagagatgttgaatgcactccgtcaatatttttggaagagatgagaaaaggcctt
ccagaagatatggcgatggacgaagaagagtttttttcaaacctcaaagccacattgaag
ccagattcttaa
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