Brachyspira pilosicoli P43/6/78: BPP43_10985
Help
Entry
BPP43_10985 CDS
T02387
Name
(GenBank) tRNA-pseudouridine synthase TrmA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bpip
Brachyspira pilosicoli P43/6/78
Brite
KEGG Orthology (KO) [BR:
bpip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpip03016
]
BPP43_10985
Enzymes [BR:
bpip01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BPP43_10985
Transfer RNA biogenesis [BR:
bpip03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BPP43_10985
Prokaryotic type
BPP43_10985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AGA67357
UniProt:
A0A3B6W4F4
LinkDB
All DBs
Position
2296533..2297276
Genome browser
AA seq
247 aa
AA seq
DB search
MTNIKITIQYDGTDFFGWQIQPNLRTVQGEIYKAVQKIYSKKSTIYGCGRTDAGVHALGQ
VANFRVEKMLVPIERVTRALNSALPKDIRIIKSEVVDDSFNARASATFREYIYVVQNSDI
SVPFYERYSWFYRKNIINEKLINEYAKYLVGEHNFTSFCSTEDENDSKFRYIERVRAIRK
KDTIYFIIRGNAFLHNMVRIIVGTLVEGQRKNMPVNFIEEILKKEDRTLAFVTAPAHGLY
FRRAFFK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacataaaaataactatacaatatgacggtacagatttttttggctggcagata
cagcctaatttgagaacggttcagggagaaatttacaaagcggttcaaaaaatatattca
aaaaaaagcactatatatggctgcggacgtactgatgctggggtgcatgctttggggcag
gtggctaattttagagttgaaaaaatgcttgtgcctatagaaagagtaaccagggcttta
aactctgctcttccaaaagacataagaataattaaatctgaagttgtagatgatagtttt
aatgctagggcttctgctacttttagagaatatatatatgtagttcaaaatagtgatata
tcagttcctttttatgagaggtattcttggttttatagaaaaaatattataaatgaaaaa
cttataaatgaatatgctaaatatcttgtaggagagcataattttacatctttttgctct
actgaagatgagaatgattctaagtttagatatattgagagagtgcgtgctataagaaag
aaagatactatatattttattataaggggtaatgcttttttgcataatatggttcgcatt
atagttggtacattggttgaggggcaaagaaagaatatgcctgttaattttatagaagag
atactaaaaaaagaggatagaactcttgcttttgtaactgctcctgctcatggactttat
tttagaagggctttttttaaatag
DBGET
integrated database retrieval system
