Candidatus Brocadia pituitae: BPIT_02420
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Entry
BPIT_02420 CDS
T07694
Name
(GenBank) conserved hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpit
Candidatus Brocadia pituitae
Pathway
bpit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPIT_02420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpit03400
]
BPIT_02420
Enzymes [BR:
bpit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BPIT_02420
DNA repair and recombination proteins [BR:
bpit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BPIT_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBO15950
LinkDB
All DBs
Position
complement(283277..284119)
Genome browser
AA seq
280 aa
AA seq
DB search
MSANEIKKELASILQAVRTAVEIEKEFGIDTITLSRPNKASRQHAPEKQSTKAPDRCGQI
RMPKEETNKRSPESPIKPLGEQTSMIEKEERVQMLEVLRNETLTCHKCPLGKKRTNLVFG
VGNPWASLMFVGEAPGRDEDLQGEPFVGRAGQLLTKIIEAIGLKRSDVYIANVLKCRPPE
NRSPLPEEIVLCVTYLLKQIEIVQPKVLCALGTFAAQTLLNTKSPVGTLRGRFHDYKGIP
MMVTYHPAYLLRNPNDKAKVWEDMKKVRDLLAELSGNDLK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaacgaaataaaaaaagaattggcatccatacttcaggctgttaggaccgcg
gttgagattgaaaaggagtttggaatcgacaccattacgctatccaggccgaacaaggcg
agtagacaacatgcacctgaaaagcagtccacaaaggcccctgacagatgcgggcaaatt
cgcatgccaaaagaagaaacgaacaaacgttcgccggagagccccataaagcctctcggt
gagcaaacttccatgatcgaaaaagaagaaagggttcagatgctggaagtgctgcggaac
gaaacgctgacctgtcacaaatgcccgctagggaagaaacgcaccaatcttgtttttggt
gttggcaatccttgggcgtcgctgatgtttgtgggtgaagcgccaggacgcgatgaagac
cttcagggcgagcccttcgtcggccgcgctggtcaattacttaccaagattattgaagcc
ataggtctgaaacgcagcgacgtctatattgccaacgtcctgaagtgtcgtcctcccgaa
aaccggagtcccctacccgaagaaatcgtcctctgtgtgacttatcttttgaagcagatt
gagatcgtccaacccaaggtcttatgtgccctgggcacctttgccgcccaaacactgctt
aatacaaagtcccccgttggcaccttgcggggaagattccacgactacaagggtatccct
atgatggttacctaccaccccgcctatctcctgagaaaccccaacgacaaggctaaggta
tgggaggacatgaaaaaggtgcgggaccttctggccgagttatccggaaacgacctaaag
taa
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