Candidatus Brocadia pituitae: BPIT_04060
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Entry
BPIT_04060 CDS
T07694
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bpit
Candidatus Brocadia pituitae
Pathway
bpit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BPIT_04060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpit03019
]
BPIT_04060
03110 Chaperones and folding catalysts [BR:
bpit03110
]
BPIT_04060
03029 Mitochondrial biogenesis [BR:
bpit03029
]
BPIT_04060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpit04147
]
BPIT_04060
Enzymes [BR:
bpit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BPIT_04060
Messenger RNA biogenesis [BR:
bpit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BPIT_04060
Chaperones and folding catalysts [BR:
bpit03110
]
Heat shock proteins
HSP60 / Chaperonin
BPIT_04060
Mitochondrial biogenesis [BR:
bpit03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BPIT_04060
Exosome [BR:
bpit04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BPIT_04060
Exosomal proteins of other body fluids (saliva and urine)
BPIT_04060
Exosomal proteins of breast cancer cells
BPIT_04060
Exosomal proteins of colorectal cancer cells
BPIT_04060
Exosomal proteins of bladder cancer cells
BPIT_04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CoV_NSP8
KIX_2
Motif
Other DBs
NCBI-ProteinID:
BBO16114
LinkDB
All DBs
Position
487323..488960
Genome browser
AA seq
545 aa
AA seq
DB search
MSAKKIIFDHDALDTVKLGVKQLADAVKITLGPRGRNVVIQKSFGSPTITKDGVTVAKEI
ELSDHMQNIGAQMVKSVASKTSDVAGDGTTTATVLAEAIFVEGLKNVTAGANAMALKRGV
DKAVGAIVKKLKEMSIPTKGRKEIEQVATVASNYDTEIGKIIADAMEKVGKDGVITVEEG
KSLQTEAKWIEGLQFDKGYLSPYFVTNPNTMQCVLEDPYILIHEKKITTAKVLVPILEKI
SQTGKPLLIIAEEIEGEALTLLVVNKLRGALRCTAVKAPGFGDKRKAMLEDIAILTGGQA
VFEDLGINMESIQLKDLGRAKKVEIDKENTIIIEGAGEGKKIKARIEQIKKEISITTSDY
DREKLQERLAKMAGGVVQINVGAATESEMKEKKARVEDALHATRAAVEEGILPGGGVALL
RCLPALDALKLSGDEAVGADIIRRALRAPLRQIASNAGVNAAIVVHKVETAKGNEGYDAS
ADRYCDMVSEGIIDPTKVVRTALQNAASISTLLLTTDAIVGKIPEKKKMPPMPPGGGYGG
YGDMY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaaaaagattatatttgatcatgatgcacttgataccgttaagcttggtgtt
aagcaactggctgatgccgtaaagattaccttggggcctcggggacgcaacgttgttata
caaaaaagttttggttcacctaccataacaaaggacggagttacggttgcaaaggaaatt
gaactttcagaccatatgcaaaatatcggtgcgcaaatggtaaaatctgttgcttcaaaa
accagcgatgtggctggtgatggcactacaactgcgacggtgcttgcagaagccatattt
gttgaaggattgaaaaatgtaacggccggtgcaaatgcgatggcgctgaaacgtggcgtc
gataaggctgttggtgcaatagtaaagaagctgaaggagatgagtattccgacaaaagga
cgaaaagagattgagcaggttgctaccgttgcctcgaattacgataccgaaattgggaaa
attattgctgatgctatggaaaaggttggaaaagatggtgttataacggtggaagagggc
aaaagcttgcaaactgaagcgaaatggattgaaggtcttcaatttgacaaggggtatctg
tcgccatattttgttacgaaccccaatacgatgcaatgcgtattggaagacccctatatt
ttaatccacgagaagaaaattacgacggcgaaggtgttggtgccgatattagaaaagatt
tctcaaacaggaaaacctcttttgattatcgcagaagagatagaaggggaggcattgact
ctcctggtggtaaataaactgcgtggtgctctgagatgcacggccgtaaaggcgccagga
tttggagataagcgcaaggctatgctggaagacattgcaatacttaccggtggccaggca
gtttttgaagaccttggcatcaatatggaatccatccagctgaaagatcttggccgggca
aagaaagttgaaatcgataaggaaaatacgattatcattgaaggggcgggagaaggcaaa
aagataaaggcgcgtattgaacagatcaaaaaggagatttcgataacgacctcagattat
gaccgcgaaaaactccaggaaaggttggcaaagatggctggaggtgtcgtgcagattaat
gtgggcgcagcgaccgaaagtgagatgaaggaaaaaaaggcgcgcgtggaagatgcgctt
cacgccacccgcgcagctgttgaagagggcattctcccaggcggaggggtagcgcttttg
cggtgtcttccggctttggatgccctgaaactatccggtgatgaggccgttggcgctgat
atcatccgcagggctttgcgggcgccattacgtcaaatcgcttccaacgcaggggtaaat
gccgcgattgttgtgcataaagttgaaaccgccaagggcaatgaaggatatgacgccagc
gctgaccggtattgtgatatggtcagtgaaggaattatcgacccgacaaaagtggtcaga
acggcgctgcaaaatgccgccagtatctctactttgcttctgacaacggatgccattgtg
ggcaaaataccggaaaagaaaaagatgcctcccatgccgccaggcggtggatacggtgga
tacggagacatgtattaa
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