Candidatus Brocadia pituitae: BPIT_10630
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Entry
BPIT_10630 CDS
T07694
Name
(GenBank) conserved hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
bpit
Candidatus Brocadia pituitae
Pathway
bpit02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpit00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BPIT_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpit03021
]
BPIT_10630
Transcription machinery [BR:
bpit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPIT_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
HTH_11
HTH_25
RBD_LARS1
Motif
Other DBs
NCBI-ProteinID:
BBO16771
LinkDB
All DBs
Position
complement(1232468..1233313)
Genome browser
AA seq
281 aa
AA seq
DB search
MEFALQVYLKELRKIPPLTMEGERELFEKVNNGDSKAKEDIITAYLPLVVKIASKFVYYG
TPLSDLISEGNIGLIRAMERFDYTLGQRFGKYASWWVKWSIQRALINNSKTIHIPIYMAE
RVSKWKKTSSKLTNALHRLPDRSEIAQELNLNEKQTRWVERAVMHTQTLTEKSLDRGDVV
ELSEYIPDESVKMPDEELIESHDKKKLTKLLETIDRQEAKVLKMRYGFDNEEPMTLREIS
NKLNISREWVRKIEKKALLRLNQLMSYREQRINKKSMLKSA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgcacttcaggtttacctaaaagagttgagaaaaatacccccgcttactatg
gaaggggaacgagagttgtttgaaaaagttaacaatggcgactcaaaggcaaaggaggat
attattacggcatatcttcctctggttgtaaagattgccagtaagtttgtctactacgga
acccccctttcggatttaattagtgagggaaatattgggcttatccgggctatggaaaga
ttcgactacacgctaggccaacggtttggcaagtatgcatcatggtgggtgaaatggtcc
atccaacgcgctttgattaataattcaaagaccatacatattcccatttatatggctgaa
cgggtttctaagtggaaaaaaacatcatcaaagttaacaaatgcccttcatagattaccc
gaccggagtgaaattgcccaagagttgaatctcaatgaaaaacagacacgatgggtcgaa
agggcggtaatgcacacgcaaacacttactgagaagagtttagatagaggtgatgttgta
gaactgagcgaatatattcctgatgaaagtgtaaaaatgcctgatgaggagttgattgaa
tctcatgacaaaaaaaaattgacaaaattgcttgaaacaattgaccgtcaggaagcaaag
gtgttaaaaatgcgatacgggtttgacaatgaagaacccatgacgctacgggagattagc
aataagctcaatattagccgtgagtgggtgagaaagattgaaaaaaaagccttgttacgg
ttaaaccagctcatgagttatcgtgagcaacgtatcaataaaaaaagcatgctcaaaagc
gcttga
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