Candidatus Brocadia pituitae: BPIT_16110
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Entry
BPIT_16110 CDS
T07694
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bpit
Candidatus Brocadia pituitae
Pathway
bpit03030
DNA replication
bpit03430
Mismatch repair
bpit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPIT_16110
03430 Mismatch repair
BPIT_16110
03440 Homologous recombination
BPIT_16110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpit03032
]
BPIT_16110
03400 DNA repair and recombination proteins [BR:
bpit03400
]
BPIT_16110
Enzymes [BR:
bpit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPIT_16110
DNA replication proteins [BR:
bpit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BPIT_16110
DNA repair and recombination proteins [BR:
bpit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BPIT_16110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
HP_1247_M
TPR-S
WHD_TFC3
Motif
Other DBs
NCBI-ProteinID:
BBO17319
LinkDB
All DBs
Position
1842906..1843913
Genome browser
AA seq
335 aa
AA seq
DB search
MMDIYQFKTLMNKGNSYPVFVFYGDEAFFVHEALSAVKKNLLKGKDPGIALIEFNGDEIS
GGVVFDELRTVPFFPGVNKLVFVEDADDFVEKNRGILEKYLQTPASRAHLILICNKWDKR
TKLATLVDKIGVSVECKKLKEHSLPNWVQTHARQYKKEITILATQKLVDDVGGNLAILDK
HLEKLSVYLGEKTVIDEKDVDALVGVDRSRTVFELTEAVAQRNVTLALKVLSQMLAHGED
SARIISLLAWQMKRLWRAKQLLQQGEDEQKVASELQLISFFAKRFFEQVKRYNLDDLAKN
YELLLDADVKSKTSSLSIQLLLELLVYRLCAKREK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatttatcagtttaagaccttgatgaataaaggcaatagctatccggtcttt
gttttttatggtgatgaggcattttttgttcacgaggcactttcggcagtgaagaagaat
ctacttaagggcaaagatcccggtatagctctgattgaattcaacggtgatgaaatttcc
gggggtgtagtgtttgatgaattaaggacggtgccgttctttccgggcgtgaataaactg
gtatttgttgaagatgcggatgattttgtagagaaaaaccgcggtatccttgaaaagtat
ttgcaaacgcctgcaagccgtgcccatcttatactgatatgcaataaatgggataaacgg
acaaaattggcaaccctggtagataagattggtgtgtctgtggagtgcaaaaagttaaag
gagcactccctgccaaattgggtgcagactcatgcacggcagtacaaaaaggaaatcact
atcctggcaacgcaaaaactcgttgatgatgtcggtggcaatctggcgattctggataaa
catcttgaaaagttgtctgtttacctgggtgagaagaccgttatcgatgaaaaggacgtg
gatgccctcgtgggtgtggatagaagccgtacggtatttgagctgacggaggcagttgcg
caaagaaatgtaacgctggcgctgaaagtgttaagccagatgctggctcacggcgaagat
tctgcgcggattattagtttgctggcatggcagatgaaaaggctgtggagggcaaaacaa
ttgctgcaacaaggggaagacgagcaaaaggttgcatccgagttgcagctcatatcgttc
tttgcaaaacggttttttgaacaggtgaaacggtataatctggatgatttggcgaaaaat
tatgaacttttactggatgccgatgtgaaaagcaagaccagttccctgagtatacagtta
ttgctggaactgcttgtgtacagactttgtgcgaaaagagagaaatag
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