Candidatus Brocadia pituitae: BPIT_19510 Help Entry BPIT_19510        CDS       T07694                                  Name (GenBank) ATP-dependent RNA helicase   KO K05592   ATP-dependent RNA helicase DeaD [EC:5.6.2.7] Organism bpit  Candidatus Brocadia pituitae Pathway bpit03018   RNA degradation Brite KEGG Orthology (KO) [BR:bpit00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     BPIT_19510  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bpit03019]     BPIT_19510    03009 Ribosome biogenesis [BR:bpit03009]     BPIT_19510 Enzymes [BR:bpit01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      BPIT_19510 Messenger RNA biogenesis [BR:bpit03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      BPIT_19510 Ribosome biogenesis [BR:bpit03009]  Prokaryotic type   rRNA helicases    BPIT_19510 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C DbpA ResIII DeaD_dimer CMS1 P-loop_SecA ERCC3_RAD25_C AAA_22 Cas3-like_C_2 CobA_CobO_BtuR DUF4897 Motif Other DBs NCBI-ProteinID:  BBO17659 LinkDB All DBs Position 2222501..2224075 Genome browser AA seq 524 aa AA seqDB search MKKLEKFRTLGLSENTLQALEKKGFEEPTPIQQKTIPILLKGEVDIIGQAQTGTGKTAAF GLPILERIPEKSKTVQTLILVPTRELAIQVSEELNSFKGDKILQIVPIYGGQSMEEQLRR LRKGIDVVVGTPGRILDHLRRKSLRLGNISYLVLDEADEMLNMGFIDDVEEIIKNTNSEK RMLLFSATMPEKIINIAEKYMRNYEMIGVKKEQLTTNLTDQIYFEVASADKFDALCRIID IEHEFYGLIFCRTKIDVDNLSNKLIERGYDAEALHGDISQNQREIIINKFRKQRINILVA TDVAARGIDIQNLTHVINYSLPQDPESYIHRIGRTGRAGKEGTAITFVTHDEYRRLIMIK KIAKTDIRKEKLPRIEDVIHQKKSRIKAEISRIITSEDMNGYVELAQEMLKVNEAAKVLA ALLKHAFQDELNESNYNEIRDVSIDRKGTTRLFVALGKIDGMTPRKLVAFFKQQAKVHSE KIRDIQIFDKFSFVTVPFEEAEIMLNIFKKNMGGKRPIVERAKK NT seq 1575 nt NT seq  +upstreamnt  +downstreamnt atgaaaaaattagaaaaattcaggaccctgggattatcagaaaataccttacaggcattg gaaaaaaaagggtttgaagaacctaccccgattcagcaaaagacgattcctatacttctc aagggagaggtagacattattgggcaggctcaaacgggaacaggaaaaacggctgcattt ggactccccatcctcgaaaggataccggaaaaatcaaagacagttcagacactgattctt gtccctacgagagaactggctatccaggtatcagaagaattaaactcatttaagggagac aaaattctgcaaatcgtgcctatctacggagggcagtcgatggaagaacaactgcgaagg ttgagaaaagggatcgacgttgtggtaggtacccccggcagaatactggatcatctcagg agaaaaagtttacgactgggaaatatatcctatctggtccttgacgaagctgatgagatg ttaaatatgggatttattgatgatgtggaagaaatcataaaaaataccaactcagagaag aggatgctgctcttttcagcaaccatgccggaaaaaatcatcaatatcgcggaaaaatat atgcgaaactacgagatgattggggtaaaaaaagaacagcttaccacaaacctgacggat cagatctattttgaagtcgcatctgcggataaatttgatgcgctctgcaggatcatcgat atagaacatgaattctatggccttatattttgcagaacaaagattgatgtagacaacctc tcaaataaacttatagaaagagggtatgatgcagaagcgttgcatggtgatatatctcaa aatcagcgggaaatcataataaacaagttcagaaaacagcggattaatattctggtagct acagacgttgctgccagagggattgatattcaaaacttaacgcatgtcattaattattct ctgcctcaggacccggaatcatacatccacaggattggaagaacaggccgggccggaaag gaagggactgccataacttttgttacgcacgatgagtacagaagacttatcatgattaaa aaaatcgcaaaaactgacatacggaaagaaaaactgccgaggattgaagatgtcatacac caaaaaaaatccagaataaaagcagaaatttcccggattattacctcggaagacatgaac ggatatgtggaacttgcacaagaaatgctgaaggtaaacgaagcggcaaaggtcctggct gcccttttaaaacacgcttttcaggatgaactgaacgaaagcaattacaatgaaatcagg gacgtttcaattgacaggaaagggacaacgcggctctttgtggcgctaggaaaaattgat gggatgacgcccagaaaattagtagcgtttttcaagcaacaagccaaagtccacagtgaa aaaataagagatattcagatatttgataaattttcttttgtaacggtcccttttgaagaa gcggagattatgttgaatatttttaagaagaacatgggcgggaaaaggccgatcgttgaa agggcaaaaaaataa

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