Candidatus Brocadia pituitae: BPIT_24410
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Entry
BPIT_24410 CDS
T07694
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bpit
Candidatus Brocadia pituitae
Pathway
bpit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BPIT_24410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpit03021
]
BPIT_24410
03400 DNA repair and recombination proteins [BR:
bpit03400
]
BPIT_24410
Enzymes [BR:
bpit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BPIT_24410
Transcription machinery [BR:
bpit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BPIT_24410
DNA repair and recombination proteins [BR:
bpit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BPIT_24410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
Tubulin_C
Motif
Other DBs
NCBI-ProteinID:
BBO18149
LinkDB
All DBs
Position
complement(2778376..2779392)
Genome browser
AA seq
338 aa
AA seq
DB search
MRIRWRGLELPVRVDVERETLTDTYGKFIAAPFERGFGHSIGNSLRRIMLSSLEGSAVVS
VRIDGISHEFTSISGIVEDVTDIMLNIKNLVIKLDTEQPKVIKIETKKKGAVKAKDIIAD
AGVEIINGDLHIATLSEDVKFNVEMEVKKGRGYVTAEENEPEEQEFGLIAIDSIFSPVRN
VRFSIEETRVGRRTNYDKLIMEIWTNSVVSPEMALVEAAKIMRKHLNPFVQYFDIGRELQ
QVEKRMGIESIPEISEEELEKKMCIPIAELDLSVRASNCLEISGIATVGDLVAKTEEQLL
EIKNFGKTTLREVKTKLAQLNLAIGMPVAIKQMEKGKG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgaataaggtggagaggtcttgaacttcctgtcagagttgatgtggaaagagagact
ttaaccgatacctatggtaagtttatagcggctccttttgagcgtggttttggtcactca
ataggtaatagtttgagaaggattatgctttcttcgttggaaggcagcgcagttgtatct
gtcagaattgatgggattagtcatgaatttacgagtatttctggtattgtagaagatgtg
actgatatcatgttgaacataaagaatcttgtgataaaattggataccgaacaacctaaa
gtcataaaaattgagacaaaaaaaaagggtgcggtgaaagcaaaagatattatagctgat
gctggagtagaaataataaacggggatttgcatatcgctacgctctctgaggatgtaaaa
tttaatgtagagatggaagtgaagaaaggtcgtggatatgtaactgctgaggaaaatgaa
ccggaagaacaagaatttgggcttattgctatagattcaattttttctcccgtgagaaac
gtccgtttctctatcgaagaaacgcgcgttggtagacgtacaaattatgacaagcttatt
atggagatatggacgaatagtgttgtttctcctgaaatggctctggttgaagcagcaaaa
attatgagaaaacatctgaatccttttgtacaatactttgatattggcagagaattgcag
caagtggaaaaaagaatgggcattgaatcgattcccgagatatctgaggaagagcttgaa
aaaaagatgtgcattcctatcgctgagttggatttatcggtgagagcctcaaattgtctt
gaaatttctggtatagcaactgtcggcgatcttgttgcaaagactgaagagcaactttta
gaaataaaaaattttggtaagactactcttagggaagttaagacgaaactggctcaatta
aatttagcgattggaatgcctgtggcgattaaacaaatggaaaaggggaaaggatga
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integrated database retrieval system
