Candidatus Brocadia pituitae: BPIT_29420
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Entry
BPIT_29420 CDS
T07694
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
bpit
Candidatus Brocadia pituitae
Pathway
bpit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPIT_29420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpit03400
]
BPIT_29420
Enzymes [BR:
bpit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BPIT_29420
DNA repair and recombination proteins [BR:
bpit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BPIT_29420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HHH_8
HHH
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BBO18650
LinkDB
All DBs
Position
complement(3337731..3338543)
Genome browser
AA seq
270 aa
AA seq
DB search
MPRILVNNFNLESTLLCGQLFRISTRDGWYIIAVRDRIFHVRQSANQLDFDGIDRESLMH
YFALDEPYSTILKEINKDRHIGKAIRRYHGLRIVRQDPWECLISFLCSSAANIPKIKLNL
EILSQSFGKKMDVLGVEMHTFPNPGDLNDYEQIVRAKTGFRAKYLKTANDLVSESFLLSL
KKLPYGEAKKALKGIPGIGDKIADCILLFSLGFTEAFPVDTWMKKILQKLYFKNQEVSNQ
KLQDFGTDYFGRYAGYAQQFLYMMARESAP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatcctggtaaataatttcaacctcgaatccacccttctgtgcggtcaattg
ttccgcatatctacaagggacggctggtatattattgccgtacgggaccgcatctttcat
gtcaggcagtcggcaaatcaattagatttcgacggcattgaccgtgaatccctgatgcat
tattttgcccttgatgagccatactccacgattttaaaagaaataaacaaagacaggcac
attggcaaggcaatcaggagataccatggcttgcgtatcgtccggcaggacccatgggaa
tgtctcatatcattcctctgttcttccgccgctaatatcccaaaaataaaactcaatctt
gaaattttgtcacaatcctttgggaaaaagatggatgtactaggagtagagatgcatacg
tttcctaatcctggtgatttaaatgactatgagcagattgtacgggcaaagactggtttt
cgggcaaagtatcttaaaacggccaacgacctcgtgagtgagtcctttttgctctcgctc
aaaaaacttccttatggagaagcaaaaaaggcgctcaaggggattcctggcatcggagat
aagattgcagattgcatcctcttgttctctttgggctttaccgaggcgttccctgtcgat
acctggatgaaaaagatactccagaaactctatttcaaaaatcaggaggtatctaatcaa
aaacttcaggacttcggaacggactattttggcagatatgcggggtatgctcagcaattt
ctttatatgatggcacgagaatccgcaccgtaa
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