Candidatus Brocadia pituitae: BPIT_33990
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Entry
BPIT_33990 CDS
T07694
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpit
Candidatus Brocadia pituitae
Pathway
bpit03030
DNA replication
bpit03430
Mismatch repair
bpit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPIT_33990
03430 Mismatch repair
BPIT_33990
03440 Homologous recombination
BPIT_33990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpit03032
]
BPIT_33990
03400 DNA repair and recombination proteins [BR:
bpit03400
]
BPIT_33990
Enzymes [BR:
bpit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPIT_33990
DNA replication proteins [BR:
bpit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BPIT_33990
DNA repair and recombination proteins [BR:
bpit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BPIT_33990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
DnaX_C
AAA_5
TIP49
AAA_16
AAA_22
AAA_14
AAA_18
AAA_30
AAA_2
ResIII
TonB_C
Glyco_tranf_2_5
RCF1-5-like_lid
AAA_19
Rad17
Sigma54_activ_2
AAA_24
nSTAND3
PIF1
DUF815
Mg_chelatase
ABC_tran
Sigma54_activat
RNA_helicase
TsaE
VbhA
Motif
Other DBs
NCBI-ProteinID:
BBO19107
LinkDB
All DBs
Position
complement(3870460..3872139)
Genome browser
AA seq
559 aa
AA seq
DB search
MSYVVLARRYRPQTFEDLVGQEPIVTTLRNAIRTSRVAHAYLLAGPRGVGKTSMARILSK
ALNCKHGPTDTPCNACDICRCISEGNDIDVLEIDGASNRGIDEVRNIRQNVSYAPSRARY
KIYIIDEVHMLTREAFNALLKTLEEPPSHVKFIFATTAVNRLPETVQSRCQRFDFRNISV
HDIEKRLSDICKTEGVQVDAAAIHMIARYARGGLRDSQSVLDQILSFCKDRISPEDVNFV
LGCIDEDKILALFDSFVRKDASSALKMVNEILSEGKTSGECIDQLLSCVRELLISSSCGK
EATWIEFNASLIQKYGNSFSQDALMYMVQIFSDARMRTTDSLLQRILLEIAVVKICRMES
VGSLYDIVERLATLEEGLLHHNDKPVTKDAETALRQEPVARQMVLEPTAEEYSTPLVNQD
GALGGGHDEKNAWEKILLLIQSKKKSTWALLKEGQFMGFKDGEMTVEFPGKCSFHKEKLD
QMEEKKFIEQCAKEAVQGKVKLKLTVSKNGIPEKSKTPVSSGRDSSDRQAVDALISEPAV
KKTLELFGGHVVKTHTKGG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgttgtattagcccgtcgatatcgcccgcaaacttttgaagatctggtagga
caagaacctattgtcacaacactccggaatgcaatccgcaccagcagggttgcccatgct
tacttactggctggtccgcgaggagtgggaaagacctcgatggcacggatactatcaaag
gcattgaattgtaaacacggacccacggatacgccttgcaatgcctgcgacatctgccgg
tgcatttctgaaggcaatgacatcgacgtcttggagattgatggcgcatcaaaccggggg
atcgatgaagtccggaacatccggcaaaatgtaagttacgccccgtctcgtgcccgttat
aaaatttacattattgacgaagtccatatgcttacccgtgaggcatttaatgccctcctg
aaaacccttgaagaacctccgtcacacgtcaagttcatctttgctacaactgccgtgaat
cgtcttcctgaaacggtgcagtcccgatgccagagattcgacttcaggaatatttctgtc
catgacattgaaaagcggctatcagacatttgcaagacggaaggggttcaggttgatgcc
gctgccattcatatgatagcgcgatatgccaggggagggttgcgggattctcaatcagtg
ttagaccaaattctctcgttttgcaaggaccggatatctccggaggacgtaaattttgtc
ctgggctgtatcgatgaagacaagatacttgccctgtttgatagttttgtcaggaaagat
gcatcgtctgccctgaaaatggtaaatgagatcttaagtgagggaaagacttccggagaa
tgcatcgatcagttactctcctgtgtgcgggagctgttgatatcctcttcgtgtggcaag
gaggcaacctggatagagttcaatgcgtctttgatacaaaaatacgggaattccttttcc
caggatgccctgatgtacatggtgcaaatattttccgatgcaaggatgcgcacgacggat
tctctcttacagcgtattttgctggagatagccgtggtaaagatatgccggatggaatcc
gtgggttcattatatgatatcgttgaaaggcttgcaaccttagaagaaggtcttctccat
cacaacgacaaacccgtaacaaaggatgcggagactgcccttcgccaggaacctgttgcc
cggcagatggttttagaaccaacagctgaagaatattccacaccattggtaaaccaggat
ggtgcattagggggggggcatgatgaaaaaaatgcatgggaaaagattcttctgttaatc
cagagcaagaaaaaatcaacctgggcgcttttgaaagaaggccagtttatggggttcaaa
gatggggaaatgacggttgaattccccggcaagtgttcctttcataaagaaaaactggac
cagatggaagagaaaaagtttatcgaacaatgtgcgaaagaggcggtgcagggcaaggta
aaactcaagctgaccgtgtcaaaaaatggaatccctgaaaaaagcaagacgccggtatcc
tccggccgggactcttctgatcggcaggcagttgatgcgctcatttctgaaccggcagtg
aaaaagacactggagctttttggtggtcacgttgttaagacgcatacgaaaggaggctaa
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