Brachyspira pilosicoli B2904: B2904_orf104
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Entry
B2904_orf104 CDS
T02225
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpj
Brachyspira pilosicoli B2904
Pathway
bpj03420
Nucleotide excision repair
bpj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B2904_orf104 (pcrA)
03430 Mismatch repair
B2904_orf104 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpj03400
]
B2904_orf104 (pcrA)
Enzymes [BR:
bpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B2904_orf104 (pcrA)
DNA repair and recombination proteins [BR:
bpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B2904_orf104 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
B2904_orf104 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
AAA_22
Terminase_6N
DUF3253
Motif
Other DBs
NCBI-ProteinID:
AFR69461
UniProt:
J9U9K7
LinkDB
All DBs
Position
complement(107920..109920)
Genome browser
AA seq
666 aa
AA seq
DB search
MDNNKQNDLLNGLNENQREGVLHIDSPLLLLAGAGSGKTLVITKKIAYLITEKHIRPENI
MAVTFTNKAANEMKERVCSMLPEIKPFRLFIRTFHSACLRILKDNAQYLNYREDFLILDE
GDRLSVIKKIMKEENTPKSIKPKDVSRYISAKKNEMRYDIGFEEEYYKKVYDKYKEYEVK
ENVMDFDDLILNTIKLFEKEKNILEFYQKRFKYILVDEFQDTNLQQYKLIKMLTQKNNNK
ETDNQLTVVGDDDQSIYAFRGANVSNILNFENDFEGTKIIRLEENYRCPKNVVEVALNVI
KNNSHRHTKNVFSNKKSDYKIENWICYTDYEEAKSVANEIELLFDEGFEAKDIVILFRTN
SQSRAYEKELMAHSINYKIVGGVGFYERAEIKDSISFLRLLTGFNDNFSIRRTINTPTRG
IGEKTFAQFEAFADKKNLTLYDAIDIIEESNISKKALNSIKEYKNILEKYSKKIEEDPQH
IEGVFFEFLKEIDYFSIFKSEGNIRIATAEDNIKELFNAYYSYLNYNYENPESSLNIRGF
LEETTLYKDNSNEDKEDAITLMTVHNAKGLEFEVVFITGLEHGVFPHYFSLEEENGIEEE
RRLFYVAITRAKQKLYLTYAKRRRISSGTMEQAPSSFLMEIPKSLLYIKEKANSYYIEID
EDAFDY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggataataataaacaaaatgatttacttaatggtttaaacgaaaatcaaagagaaggt
gtgcttcatatagatagccctcttcttctcttggcaggtgctggaagcggtaaaacttta
gttatcaccaaaaaaatagcataccttataacagaaaaacacataaggccagaaaatata
atggctgtaactttcacaaacaaagcagctaatgaaatgaaagaaagggtatgctctatg
cttccagaaataaaaccatttaggctgtttataagaacatttcactctgcatgtttgaga
atattaaaagataatgctcaatatttaaattatagagaagactttcttattttagacgag
ggcgatagattaagcgttataaaaaaaataatgaaagaagaaaacactccaaaatctata
aaaccaaaagatgtttcaagatatatatctgccaaaaaaaatgaaatgagatatgatatt
ggttttgaagaagagtattacaaaaaagtatatgataaatacaaagagtatgaagttaaa
gaaaatgtaatggactttgacgatttaatactcaacacaataaaactatttgaaaaagaa
aaaaatatacttgagttttatcaaaagagatttaaatatattttagttgatgagtttcaa
gatacaaatttgcagcaatacaaattaataaaaatgcttactcaaaaaaataataacaaa
gaaacagataatcaattaaccgttgtaggcgatgatgaccagagtatatatgcctttaga
ggcgcaaatgtatctaatatattaaactttgaaaatgattttgaaggcactaaaataatt
cgccttgaagaaaattacagatgccctaagaatgtagttgaagtggctttgaatgtaata
aaaaacaatagccataggcacacaaaaaatgttttctcaaataaaaaaagcgattataaa
atagaaaattggatatgttatacagattatgaagaggcaaaatcggttgctaatgaaata
gagttattgtttgacgaaggttttgaagcaaaagatatagttattttgtttagaaccaac
agccaatcaagagcatacgaaaaagaacttatggctcattctattaattataaaatagta
ggaggcgttggtttttatgaaagagcagagattaaagacagcatttcttttttgagactt
cttacaggctttaatgataactttagcataagaagaactatcaatacacccacaagagga
ataggagaaaaaacttttgcccaatttgaagcatttgcagataaaaaaaatctcacactc
tatgatgcaatagatattatagaagaatctaatatttcaaaaaaagctcttaacagcatt
aaagaatataaaaatatattggaaaaatattcaaaaaaaatagaagaagaccctcagcat
atagaaggagtattttttgagtttctcaaggaaatagattatttttcaatatttaaaagc
gaaggcaatataagaatagcaacagcagaagataatataaaagagctttttaatgcatac
tacagctatttaaattacaattatgaaaacccagaaagcagtttaaatataagaggattt
ttagaagagacaacactctataaagacaatagcaacgaagataaagaagatgcaattact
cttatgacagtacacaatgccaaaggattagagtttgaagtggtgtttattacagggctt
gaacatggagtttttcctcattacttttcactagaagaagaaaacggcatagaagaagag
agaagacttttttatgtagcaattacaagagctaaacaaaaactatacctcacatacgca
aaaagaagaagaataagctcaggcactatggaacaagctccttcatcatttttaatggag
ataccaaaatctttattatatataaaagaaaaggctaatagctattatatagaaatagat
gaagatgcattcgattattaa
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