Brachyspira pilosicoli B2904: B2904_orf1233
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Entry
B2904_orf1233 CDS
T02225
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpj
Brachyspira pilosicoli B2904
Pathway
bpj03030
DNA replication
bpj03410
Base excision repair
bpj03420
Nucleotide excision repair
bpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B2904_orf1233
03410 Base excision repair
B2904_orf1233
03420 Nucleotide excision repair
B2904_orf1233
03440 Homologous recombination
B2904_orf1233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpj03032
]
B2904_orf1233
03400 DNA repair and recombination proteins [BR:
bpj03400
]
B2904_orf1233
Enzymes [BR:
bpj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B2904_orf1233
DNA replication proteins [BR:
bpj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B2904_orf1233
DNA repair and recombination proteins [BR:
bpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B2904_orf1233
NER (nucleotide excision repair)
GGR (global genome repair) factors
B2904_orf1233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
RNase_T
DUF6139
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFR70572
UniProt:
J9TW33
LinkDB
All DBs
Position
complement(1272547..1275324)
Genome browser
AA seq
925 aa
AA seq
DB search
MKKTFLIIDAFGILYRYHFIFLKRPLINSKGQNVSSINGFLRTYFSLINTYPADYTAIAL
DSSRKTFRSEIYKAYKENRESMPDDLRSQIPILYNLIDALGITRIVLDNYEADDIVGCIA
QNNKKENIKTIIYSPDKDILQLVDENTKVIASNKDNELIEYDINMVKEKRGVYPNQIIDL
LSLMGDASDNIPGVKGIGEKTALKLLEEYDTLDNIYKNIDSIKGKIQEKLIADKDNAYMS
YELATIKREIEELNIDYKEIEKNKINIDEVNKILDDLELKQIRDKINSYIYGSSSKKKEE
KVQISKQTKQETNAEDNTEKTIVVSNAKDNNAKYYLIENETELQNLLNDINAKKLVCIDF
ETTGLDTLTDEIIGISFAIKSKEAFYLDLSGRTNIDKEACKKLVFDTLAKEDIKIIGHNL
KYEYKMMRAIDKKMGNMYFDTMVAAYLINPSRGRYNMDDLALSYLSYNTIKYSDITDNAK
KTLLDVELKDVVEYACEDADITFRFYEYFSPLLNTYNLEDLFFNVEMPLISVLADMEFDG
VYISTEKMKSLSEEYASLLEKTKAKIYEKAGEEFNLQSPKQLEYILFEKLKINSTKKTKT
GAYSTDEEVLRELAQREKIAEYMLTYRKYSKLKNTYLDVFPTLVHKKTNRIHASFNQTVT
ATGRLSSSEPNLQNIPARGDEGKDIRNTFIAEKGNVLIAADYSQIELRLLAHFSNDPVLV
EAFKNNDDIHRKTAMKIYSVSKEHVTPSMRNTAKIINFSIIYGKTAFGLSKELNISRKEA
DDFIKGYFSTYSQVKPFCEKVIEDVKSKGYVRTMLGRIRDLSKTINSSNAVVRNEAERMA
LNTLIQGSAADMIKVAMIAIHKEFKNHFKTAKIVMQVHDELVVEVSEKESDKAMTIMKEI
MEHSVKTNVPITVDIHKGLSWGDIH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacatttcttattattgatgcttttggtatactttacagatatcattttatt
tttttgaaacgccctctaataaactcaaaaggtcaaaatgtatcttcaattaacggtttt
ttaagaacatacttttctttgattaacacctaccctgctgattatactgcaatagcacta
gacagttcaagaaaaacttttagaagtgaaatatataaagcttataaagaaaatagagaa
agcatgcctgatgatttaagaagtcaaatacctatattatacaatcttatagatgcactt
ggaatcacaaggattgttcttgataattatgaggctgatgatattgtaggatgcattgct
caaaataataaaaaagaaaatattaaaactataatatattctccagataaagatattctt
cagcttgttgatgagaacacaaaagtaatagcaagcaataaagataatgaattaatagaa
tatgatataaatatggttaaagaaaaaagaggagtataccctaatcagattatagattta
ctttctctaatgggagatgcttctgataatatacctggtgttaaaggaattggagagaaa
acagctttaaaacttcttgaagaatatgacacattagacaacatatataaaaatattgat
tctataaaaggaaagatacaagaaaaacttattgctgataaagacaatgcttatatgagc
tatgagttagctacaattaaaagagagatagaagaattaaatatagattataaagaaatt
gaaaaaaacaaaattaatatagatgaagttaataaaatattagatgatttagaattaaaa
caaataagagacaagattaattcatatatatatggttcttcttcaaagaaaaaagaagaa
aaggttcaaatatctaaacaaactaaacaagaaactaacgcagaagataacacagaaaaa
actatagtagtatccaacgctaaagataataatgctaaatactatttaatagaaaatgaa
acagaattacaaaatcttttaaatgatataaatgctaaaaaactcgtttgtatagatttt
gaaactacaggattagacactttaacagatgaaataataggaatatcatttgcaataaaa
tcaaaagaagctttttatttagatttaagcggaagaacaaatatagataaagaagcttgc
aaaaaattagtatttgatactttagcaaaagaagacataaaaataataggtcataattta
aaatatgaatacaagatgatgcgtgccattgataaaaaaatgggcaatatgtattttgac
actatggtagctgcctacttgattaacccaagcagaggcagatacaatatggacgacctt
gctttaagctatttatcatacaacactataaaatatagcgatattacagataatgctaaa
aagactttacttgatgttgaattaaaagatgttgttgagtatgcttgtgaagatgctgat
attacatttagattttatgaatacttttctccgcttttaaacacatataatcttgaggat
ttattttttaatgtagagatgcctcttattagtgtgcttgctgatatggagtttgatggt
gtttatataagcacagaaaaaatgaaatctctatcagaagaatatgcttcacttttagaa
aaaacaaaagcaaaaatatacgaaaaagcaggagaagagtttaatttacaatctccaaaa
cagcttgaatatattttatttgaaaaactaaaaattaactctactaaaaaaacaaaaaca
ggtgcttattcaacagatgaagaagtgcttagagaacttgctcaaagagaaaaaattgct
gagtatatgctcacatacagaaaatactcaaaattaaaaaacacatatcttgatgtattt
cctacactagtgcataaaaaaactaatagaatacatgcttctttcaatcaaacagtaact
gcaacaggacgtttatcttcatcagagcctaatttgcaaaatatacctgcaagaggcgat
gaaggcaaagacattagaaacacttttatagcagaaaaaggaaatgtattaatagcagca
gactactctcaaatagaattaagactattagctcatttcagtaatgaccctgtgttagtg
gaagctttcaaaaacaatgatgatatacacagaaaaactgcaatgaaaatatattctgtg
agcaaggaacatgtaactccttcaatgagaaacactgcaaaaataattaacttctctatt
atctatggtaaaacagcattcgggctttcaaaagaattaaacatatcaagaaaagaagct
gatgattttattaaaggatatttttcaacatattctcaagtaaaaccattctgcgaaaaa
gttatagaagatgtaaaatccaagggttatgttcgcactatgcttggaagaattagagat
ttatctaaaactataaactcatcaaatgcggttgtgagaaatgaagctgaaagaatggca
ttaaacactctcattcagggaagtgctgctgatatgataaaagtagctatgattgctata
cataaagagtttaaaaatcatttcaaaactgctaaaattgttatgcaggtgcatgatgaa
ttggttgttgaagtttctgaaaaagaatctgataaagctatgactataatgaaagaaata
atggagcactctgttaaaactaatgttcctattacagttgatatacataagggattaagt
tggggagatattcattaa
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