Brachyspira pilosicoli B2904: B2904_orf1768
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Entry
B2904_orf1768 CDS
T02225
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bpj
Brachyspira pilosicoli B2904
Pathway
bpj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B2904_orf1768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpj03400
]
B2904_orf1768
DNA repair and recombination proteins [BR:
bpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B2904_orf1768
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B2904_orf1768
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
MAAL_C
DUF244
Helicase_helical
Motif
Other DBs
NCBI-ProteinID:
AFR71098
UniProt:
J9UW16
LinkDB
All DBs
Position
1824630..1826669
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AA seq
679 aa
AA seq
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MKSFKIESNFKPSGDQITAIDSLVKGLENKNKYQTLLGVTASGKTFTIANVIEKANRPTL
VMSHNKTLAAQLYRELKDFFPNNAVEYFVSYYDYYQPEAYVPAKDLYIDKDASVNDEIDR
LRLKATTSLLERRDVIIVASVSCIYGLGSPEDYRKLYIAIEKDGEYDRDEIIEKLVSIQY
ERVKDVLERARFKVMGDTLEIMSAYSDEVIRVEFFGDTVERIIKINPITRQKIAEQDRVV
IYPAKHFVTGGDKLAAGIKLIEEELEEQYNKFKSEGKLVEAERIYGRTKYDLEMLREVGY
CAGIENYSRPLSGRKEGDRPACLIDYFPKDFLTIIDESHVSVPQIRGMFFGDRSRKETLV
KYGFRLPSALDNRPLFFEEFESLTNDTIYISATPAEYELKKSSQVVEQIIRPTGLLDPII
EVYPINGQIDRILEEIKKTVSNNERIFITTLTKKMAEDLTKYLNENGVRTRYLHSDIQTV
ERVEIIRDLRLGAFDVLVGINLLREGLDVPEVSLILILDADKTGFLRNTTTLIQTIGRAA
RNANGRVIMFADTISDAMKVAIEETERRRKIQMDYNKEHNITPKTIIKKIQDIIEREEKV
ETSYELHFDFRRFNERVKIDPEQKSDDYIKELEKEMKKASDSLEFEKAIEIREKINQLKQ
LKPAKKSVHKNITSKKPKH
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagttttaaaatagaatcgaatttcaagccttcaggagaccaaataacagcaata
gactctttagttaaagggcttgaaaataaaaataaatatcaaacactgctcggagttact
gcaagcggaaagacattcactatagcaaatgttatagaaaaagcaaaccgccctactctt
gtaatgtcgcataacaaaactttggcagcacagctttacagagaattaaaagacttcttt
ccaaacaatgcagttgaatacttcgtttcatactacgattattatcagcctgaagcatat
gttcctgctaaggatttatatattgataaagacgcctcagttaatgatgagattgacagg
ctaagacttaaagctactacttcgcttcttgaaaggagagatgttataatcgttgcttct
gtttcttgtatatatggtttgggttctcctgaagattatagaaagctctatatagcaata
gaaaaagacggagaatacgacagagatgagataatcgaaaaattagtgtctatacaatat
gaacgtgttaaagatgtgcttgagagggcaagatttaaagtaatgggagatactttagag
ataatgagtgcctattctgatgaggttataagagtagagttttttggagataccgttgaa
cgcatcataaaaattaaccctatcacaagacaaaaaattgccgagcaagatagagttgta
atatatcctgcaaaacacttcgttacaggcggagacaaattagcagcaggaataaaatta
atagaagaagaacttgaagagcaatataataaatttaaatccgaaggaaaattggtagaa
gctgaaagaatatacggaagaacaaaatatgacttagaaatgcttagagaagtgggatac
tgtgctggtatagaaaactactctcgcccattgtcaggacgtaaagagggagataggcct
gcttgtttgatagactattttccaaaagattttttaacgataatagatgagtcgcatgtg
agtgttcctcaaattagaggaatgttttttggagatagaagcagaaaagagactttagta
aaatatggttttaggcttccttcagcattagacaatcgtccattattttttgaagagttt
gaaagcctcactaatgatacaatatatattagtgctactcctgcagaatatgaacttaaa
aaaagcagtcaagttgtagagcagataattcgccctacaggactccttgaccctataatt
gaagtataccctataaacggtcaaatagacagaattcttgaagagattaaaaaaacagta
tccaacaacgaaagaatatttataacaacactcactaaaaaaatggcagaagacctcaca
aaatatttaaatgaaaatggagtaagaactcgttatttgcattcagacattcaaacagta
gagcgtgtagagataataagagatttgaggcttggagcttttgatgtgcttgtgggtatt
aaccttttaagagaggggcttgatgtacctgaagtatcactcatactaatacttgatgcc
gacaaaacaggttttttaagaaataccactactctaatacagactatagggcgtgctgca
agaaatgccaacggcagagtgataatgtttgcagacactataagcgatgctatgaaagta
gccattgaagagacagaaagaagaagaaaaatacaaatggactacaacaaagagcataac
atcaccccaaaaacaataatcaaaaaaatacaagatataattgaacgcgaagaaaaagtt
gaaacctcttatgagcttcattttgactttagacgcttcaatgaaagagtaaaaattgac
cctgagcaaaaaagtgatgattatataaaagagcttgaaaaagagatgaaaaaagcttca
gatagcttagagtttgaaaaggccattgaaataagagagaagataaatcagcttaaacaa
ttaaagccggcaaaaaaatctgtgcataaaaacatcacttcaaaaaagcctaaacattaa
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