Brachyspira pilosicoli B2904: B2904_orf1808
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Entry
B2904_orf1808 CDS
T02225
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bpj
Brachyspira pilosicoli B2904
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpj03032
]
B2904_orf1808 (topA)
03400 DNA repair and recombination proteins [BR:
bpj03400
]
B2904_orf1808 (topA)
Enzymes [BR:
bpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B2904_orf1808 (topA)
DNA replication proteins [BR:
bpj03032
]
Prokaryotic type
DNA Topoisomerases
B2904_orf1808 (topA)
DNA repair and recombination proteins [BR:
bpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B2904_orf1808 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
HVO_2753_ZBP
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AFR71138
UniProt:
J9UW54
LinkDB
All DBs
Position
complement(1863848..1865953)
Genome browser
AA seq
701 aa
AA seq
DB search
MATKTKEKKTTKKKLVIVESPAKAKTINRYLGSDYVVLSSMGHLIDLPRSRLAIDVDNGF
EPEYITIRGRAKILNDLKKEAKKSEEVLLAADDDREGESIAWHIGNKIRSVNSAVPIKRI
VFHEITKDALKEAIDKPRDIDIAKVNAQKARRVLDRLIGYNLSPLLWEKIKRGLSAGRVQ
NVALLIICNREDEIETFVPVEYWTFGVFLKHKNKEFLAELQKYKGEKPDLKTKEDVDAIM
EHLKDKTYTVSSIEIKDRLRNPTAPYTTSKLQQAASTSLGYNSSKTMQIAQTLYEGVSIA
GEATGLITYMRTDSVRISPVAQEQARDFIQKEYGSNYLPPEPPNYSVKKNAQDAHEAIRP
TNVFLTPDSIKEYLKPEQYKLYKLIWERFVSSQMLPAKMKNTRAVIVAGDCEFAVSSSKI
EFDGFMKVLTIDKEDKEKASKMPSLSNGEVCDFVEHNPQQHFTTPPPRYTDASLVKILEE
SGIGRPSTYAPTIKTIISRHYVQRKGKQLVPTELGKLVNELISENFPELVNINFTAEMES
KLDKIEDDNVEWNNILKEFYPHFLDTLKTATENIHNMKDFFNEETDFVCEKCGKKMIKRL
GRYGYFIACSGFPECKNTKGISFGICPKCGGDITLKRSKRGREFYGCSNYPKCDFVSWDK
PLLEPCPKCNGLMVEKNIKNKGLFKVCIKEDCGYSEEIKEE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaaactaaagaaaagaaaactactaaaaagaaattagtaatagttgagtcg
cctgctaaggcaaaaactataaatagatatttagggtcagattatgtagtattatcatca
atggggcatttaatagatttgccaagaagcagactagctatagatgtagacaatggtttt
gagcctgaatatattacaataagaggaagagctaagatattaaatgatcttaaaaaagag
gcaaagaaatctgaagaggtgttgcttgcagccgatgatgatagggaaggggagagtatt
gcttggcatataggaaataaaataagaagcgttaattctgctgtacctataaaaagaata
gtttttcatgagattacaaaagatgcacttaaagaagccattgataaacctagagatata
gacatagcaaaagtaaatgcacaaaaagcaagaagagtattagacagacttattggttat
aatttaagccctttgctttgggagaagataaaaagaggtctttctgcaggaagagtacag
aatgtcgctttgcttataatttgtaatagagaagatgaaatagaaacatttgttcctgta
gaatattggacttttggagtatttttaaaacataaaaataaagagtttttagcagagctt
caaaaatacaaaggtgaaaaacctgatttaaaaacaaaagaagatgttgatgctataatg
gagcatttaaaagataaaacctatacagtatcaagtatagagataaaagacagattaaga
aatccaacagctccatacactacaagtaaattacagcaagcagcaagtacatctttaggc
tataactcatcaaagacaatgcaaatagcacaaacactctatgaaggagtttctatagca
ggagaggctacaggacttataacatatatgcgtaccgatagtgtgagaatatctccagta
gcacaagagcaggcgagggattttatacaaaaagaatatggaagtaattatttacctcca
gagcctccaaactattctgtaaaaaagaatgcacaagatgctcacgaagctataagacct
actaatgtatttttaacaccagatagtattaaagaatatttaaaacctgaacagtataaa
ctttataaacttatatgggagagatttgtatcttctcaaatgcttcctgcaaaaatgaaa
aatacaagagcggtaattgttgcaggcgattgtgagtttgctgtttcatcatcaaaaata
gagtttgacggatttatgaaagtgcttactatagacaaagaagataaagaaaaggcctca
aaaatgcctagtttgtcaaatggtgaggtatgcgattttgtagagcataatcctcagcag
cactttacaacacctcctccaagatatacagatgcttcattagtaaaaatacttgaagaa
tcaggaataggaagaccttctacttatgctcctacaataaaaacaattatatcaagacat
tatgtacagagaaaaggtaaacagcttgtaccaacagagcttggaaaacttgttaatgaa
cttataagcgaaaatttcccagaacttgtaaatattaactttactgccgagatggaaagt
aaacttgataaaatagaagacgataatgtagaatggaataatatattaaaagagttctat
cctcattttttggatacgctcaaaactgctacagaaaatattcacaatatgaaagatttc
tttaatgaagagactgattttgtatgtgagaaatgcggcaagaagatgattaaacgttta
ggaagatacggatattttattgcttgttctggttttcctgaatgtaaaaatactaagggt
atatcttttggtatttgtcctaaatgcggaggcgacattacattaaagcgttctaagagg
ggaagagagttttatggttgttccaattatcctaaatgcgattttgtaagttgggataaa
cctttgcttgagccttgtcctaaatgtaatgggcttatggtagagaagaatattaaaaac
aaaggattgtttaaagtttgtatcaaggaagattgtggttattcagaggaaataaaagaa
gaataa
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